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Bump scipy, vtk, and pythreejs. Avoiding Sphinx update #1867

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Bumps scipy, vtk, sphinx and pythreejs. These dependencies needed to be updated together.
Updates scipy from 1.10.0 to 1.10.1

Release notes

Sourced from scipy's releases.

SciPy 1.10.1 Release Notes

SciPy 1.10.1 is a bug-fix release with no new features compared to 1.10.0.

Authors

  • Name (commits)
  • alice (1) +
  • Matt Borland (2) +
  • Evgeni Burovski (2)
  • CJ Carey (1)
  • Ralf Gommers (9)
  • Brett Graham (1) +
  • Matt Haberland (5)
  • Alex Herbert (1) +
  • Ganesh Kathiresan (2) +
  • Rishi Kulkarni (1) +
  • Loïc Estève (1)
  • Michał Górny (1) +
  • Jarrod Millman (1)
  • Andrew Nelson (4)
  • Tyler Reddy (50)
  • Pamphile Roy (2)
  • Eli Schwartz (2)
  • Tomer Sery (1) +
  • Kai Striega (1)
  • Jacopo Tissino (1) +
  • windows-server-2003 (1)

A total of 21 people contributed to this release. People with a "+" by their names contributed a patch for the first time. This list of names is automatically generated, and may not be fully complete.

Commits
  • c1ed5ec REL: 1.10.1 release commit [wheel build]
  • 5f022bd Merge pull request #18001 from tylerjereddy/treddy_scipy_1_10_1_rd2
  • 5789a76 MAINT: test wheel builds [wheel build]
  • 79bc9c3 DOC: update relnotes/mailmap
  • 6abc551 BUG: diffev exponential crossover
  • 9bb12cd DOC: update link of the logo in the readme
  • c33c679 BUG: Use raw strings for paths
  • 78e790c Fix powm1 overflow handling
  • a225f2b BUG: fix Johnson's algorithm.
  • 04e26b6 BUG: special: Fix handling of powm1 overflow errors (#17855)
  • Additional commits viewable in compare view

Updates vtk from 9.2.5 to 9.2.6

Updates sphinx from 5.3.0 to 6.1.3

Release notes

Sourced from sphinx's releases.

v6.1.3

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.1.2

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.1.1

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.1.0

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.0.1

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.0.0

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.0.0b2

Changelog: https://www.sphinx-doc.org/en/master/changes.html

v6.0.0b1

Changelog: https://www.sphinx-doc.org/en/master/changes.html

Changelog

Sourced from sphinx's changelog.

Release 6.1.3 (released Jan 10, 2023)

Bugs fixed

  • #11116: Reverted to previous Sphinx 5 node copying method
  • #11117: Reverted changes to parallel image processing from Sphinx 6.1.0
  • #11119: Supress ValueError in the linkcheck builder

Release 6.1.2 (released Jan 07, 2023)

Bugs fixed

  • #11101: LaTeX: div.topic_padding key of sphinxsetup documented at 5.1.0 was implemented with name topic_padding

  • #11099: LaTeX: shadowrule key of sphinxsetup causes PDF build to crash since Sphinx 5.1.0

  • #11096: LaTeX: shadowsize key of sphinxsetup causes PDF build to crash since Sphinx 5.1.0

  • #11095: LaTeX: shadow of :dudir:topic and contents_ boxes not in page margin since Sphinx 5.1.0

    .. _contents: https://docutils.sourceforge.io/docs/ref/rst/directives.html#table-of-contents

  • #11100: Fix copying images when running under parallel mode.

Release 6.1.1 (released Jan 05, 2023)

Bugs fixed

  • #11091: Fix util.nodes.apply_source_workaround for literal_block nodes with no source information in the node or the node's parents.

Release 6.1.0 (released Jan 05, 2023)

Dependencies

Incompatible changes

... (truncated)

Commits
  • 776d01e Bump to 6.1.3 final
  • a2e922a CHANGES for Sphinx 6.1.3
  • 31162a9 Handle exceptions for get_node_source and get_node_line
  • dcb4429 Restore Sphinx 5 nodes.Element copying behaviour
  • 2a7c40d Undo parallel image changes
  • 7841d3d Ignore more checks in Ruff 0.0.214
  • ddbc5b5 Bump version
  • 393b408 Bump to 6.1.2 final
  • d8a5dd8 Add note to CHANGES for PR 11100
  • a1cd19e Fix copying images under parallel execution (#11100)
  • Additional commits viewable in compare view

Updates pythreejs from 2.4.1 to 2.4.2

Commits

Bumps [scipy](https://github.com/scipy/scipy), [vtk](https://vtk.org), [sphinx](https://github.com/sphinx-doc/sphinx) and [pythreejs](https://github.com/jupyter-widgets/pythreejs). These dependencies needed to be updated together.

Updates `scipy` from 1.10.0 to 1.10.1
- [Release notes](https://github.com/scipy/scipy/releases)
- [Commits](scipy/scipy@v1.10.0...v1.10.1)

Updates `vtk` from 9.2.5 to 9.2.6

Updates `sphinx` from 5.3.0 to 6.1.3
- [Release notes](https://github.com/sphinx-doc/sphinx/releases)
- [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES)
- [Commits](sphinx-doc/sphinx@v5.3.0...v6.1.3)

Updates `pythreejs` from 2.4.1 to 2.4.2
- [Release notes](https://github.com/jupyter-widgets/pythreejs/releases)
- [Commits](jupyter-widgets/pythreejs@2.4.1...2.4.2)
@github-actions github-actions bot added the Maintenance General maintenance of the repo (libraries, cicd, etc) label Feb 21, 2023
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Please add one of the following labels to add this contribution to the Release Notes 👇

@germa89 germa89 changed the title Bump scipy, vtk, sphinx and pythreejs Bump scipy, vtk, and pythreejs. Avoiding Sphinx update Feb 21, 2023
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codecov bot commented Feb 21, 2023

Codecov Report

Merging #1867 (bb213b1) into main (3457cb5) will decrease coverage by 0.04%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##             main    #1867      +/-   ##
==========================================
- Coverage   85.72%   85.68%   -0.04%     
==========================================
  Files          44       44              
  Lines        7840     7840              
==========================================
- Hits         6721     6718       -3     
- Misses       1119     1122       +3     

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LGTM.

image

@germa89 germa89 merged commit 6a4237c into main Feb 21, 2023
@germa89 germa89 deleted the dependabot/pip/main/scipy-and-vtk-and-sphinx-and-pythreejs-1.10.1 branch February 21, 2023 10:10
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