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fix piping of constructors to Graph after #548 #553

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merged 2 commits into from
Aug 25, 2023

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martinfleis
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This is an intermediate step ensuring that all the piping to the constructors works again after it was broken by changes in #548.

I'll likely self-merge this and continue with the sorting stuff. That may include further changes to data structures returned by individual functions, so don't take the changes here as something we should settle on.

@@ -112,6 +112,9 @@ def test_correctness_voronoi_clipping():
numpy.testing.assert_array_equal(G_alpha.adjacency.index, alpha_known[0])
numpy.testing.assert_array_equal(G_alpha.adjacency.neighbor, alpha_known[1])


# TODO: this now fails, probably never worked.
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This was a new test added in #548 which fails now. I may look into it later but just marked it with todo now.

@martinfleis martinfleis changed the title fix piping after #548 fix piping of constructors to Graph after #548 Aug 25, 2023
if kernel is None and bandwidth is None:
numpy.testing.assert_array_equal(weights, numpy.ones_like(heads))
assert set(zip(heads, tails)) == set(zip(tails, heads)), "all triangulations should be symmetric, this is not"
# @parametrize_constructors
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I've commented this out for now because this results in a huge number of combinations that take ages to process. I honestly don't think we need to test all those combinations anyway.

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codecov bot commented Aug 25, 2023

Codecov Report

Merging #553 (6ee4b61) into geographs (b5d5dc8) will decrease coverage by 0.1%.
Report is 38 commits behind head on geographs.
The diff coverage is 74.7%.

Impacted file tree graph

@@             Coverage Diff             @@
##           geographs    #553     +/-   ##
===========================================
- Coverage       81.1%   81.0%   -0.1%     
===========================================
  Files            127     127             
  Lines          14560   14704    +144     
===========================================
+ Hits           11801   11910    +109     
- Misses          2759    2794     +35     
Files Changed Coverage Δ
libpysal/graph/_utils.py 44.8% <50.0%> (+2.1%) ⬆️
libpysal/graph/_kernel.py 64.5% <62.5%> (-4.7%) ⬇️
libpysal/graph/base.py 95.8% <73.9%> (-2.4%) ⬇️
libpysal/graph/_triangulation.py 91.9% <78.0%> (-7.3%) ⬇️
libpysal/graph/tests/test_triangulation.py 90.3% <90.0%> (-9.7%) ⬇️
libpysal/graph/_set_ops.py 45.7% <100.0%> (+6.4%) ⬆️
libpysal/graph/tests/test_base.py 100.0% <100.0%> (ø)
libpysal/graph/tests/test_builders.py 100.0% <100.0%> (ø)

... and 2 files with indirect coverage changes

@martinfleis martinfleis merged commit 4abf71b into pysal:geographs Aug 25, 2023
9 checks passed
@martinfleis martinfleis deleted the piping branch August 25, 2023 21:17
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