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Any change to a Python header file triggers a rebuild of Python core objects. The extension modules are not automatically rebuild in several cases. This is slightly annoying for core development because it forces me to do make clean too often.
setup.py adds dependencies on Includes/*.h but not on header files in "internal" and "cpython" subdirectory
Modules/Setup and makesetup do not add a dependency on PYTHON_HEADERS
Modules/Setup is also missing dependencies on module-specific headers, e.g. _sre.o should depend on sre.h.