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New
local-repository
option allows specification of a pre-existing local clone/checkout of a repository viarepository-location
. This local repo checkout is copied into the qiime-deploy temp dir and used as if it was checked out from a remote repository.This was tested on an Ubuntu EC2 instance with both SVN and git repos. Fixes #24.
A corresponding pull request to qiime-deploy-conf will also be issued and should be merged if/when this pull request is merged.