This repository include the R code to
- process the spatial transcriptomic (ST) counts from Visium SpaceRanger
- plot the ST figures for the manuscript Deep Learning for Liver Cancer Phenotyping
- differential gene expression analysis
Process and analyze spatial transcriptomic data for cHCC CCA reclassification project
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qinghezeng/ST_cHCC-CCA
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Process and analyze spatial transcriptomic data for cHCC CCA reclassification project
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