train.py

import argparse
import math
from signal import pause
from time import sleep
from xxlimited import Null
import h5py
import numpy as np
import tensorflow as tf
import socket
import importlib
import os
import sys
BASE_DIR = os.path.dirname(os.path.abspath(__file__))
sys.path.append(BASE_DIR)
sys.path.append(os.path.join(BASE_DIR, 'models'))
sys.path.append(os.path.join(BASE_DIR, 'utils'))
import provider
import tf_util

parser = argparse.ArgumentParser()
parser.add_argument('--gpu', type=str, default=0, help='GPU to use [default: GPU 0]')
parser.add_argument('--model', default='pointnet_cls', help='Model name: pointnet_cls or pointnet_cls_basic [default: pointnet_cls]')
parser.add_argument('--log_dir', default='log', help='Log dir [default: log]')
parser.add_argument('--num_point', type=int, default=1024, help='Point Number [256/512/1024/2048] [default: 1024]')
parser.add_argument('--max_epoch', type=int, default=250, help='Epoch to run [default: 250]')
parser.add_argument('--batch_size', type=int, default=32, help='Batch Size during training [default: 32]')
parser.add_argument('--learning_rate', type=float, default=0.001, help='Initial learning rate [default: 0.001]')
parser.add_argument('--momentum', type=float, default=0.9, help='Initial learning rate [default: 0.9]')
parser.add_argument('--optimizer', default='adam', help='adam or momentum [default: adam]')
parser.add_argument('--decay_step', type=int, default=200000, help='Decay step for lr decay [default: 200000]')
parser.add_argument('--decay_rate', type=float, default=0.7, help='Decay rate for lr decay [default: 0.8]')
FLAGS = parser.parse_args()


BATCH_SIZE = FLAGS.batch_size
NUM_POINT = FLAGS.num_point
MAX_EPOCH = FLAGS.max_epoch
BASE_LEARNING_RATE = FLAGS.learning_rate
GPU_INDEX = FLAGS.gpu.split(",")
MOMENTUM = FLAGS.momentum
OPTIMIZER = FLAGS.optimizer
DECAY_STEP = FLAGS.decay_step
DECAY_RATE = FLAGS.decay_rate

MODEL = importlib.import_module(FLAGS.model) # import network module
MODEL_FILE = os.path.join(BASE_DIR, 'models', FLAGS.model+'.py')
LOG_DIR = FLAGS.log_dir
if not os.path.exists(LOG_DIR): os.mkdir(LOG_DIR)
os.system('cp %s %s' % (MODEL_FILE, LOG_DIR)) # bkp of model def
os.system('cp train.py %s' % (LOG_DIR)) # bkp of train procedure
LOG_FOUT = open(os.path.join(LOG_DIR, 'log_train.txt'), 'w')
LOG_FOUT.write(str(FLAGS)+'\n')

MAX_NUM_POINT = 2048
NUM_CLASSES = 40

BN_INIT_DECAY = 0.5
BN_DECAY_DECAY_RATE = 0.5
BN_DECAY_DECAY_STEP = float(DECAY_STEP)
BN_DECAY_CLIP = 0.99

HOSTNAME = socket.gethostname()

# ModelNet40 official train/test split
TRAIN_FILES = provider.getDataFiles( \
    os.path.join(BASE_DIR, 'data/modelnet40_ply_hdf5_2048/train_files.txt'))
TEST_FILES = provider.getDataFiles(\
    os.path.join(BASE_DIR, 'data/modelnet40_ply_hdf5_2048/test_files.txt'))

def log_string(out_str):
    LOG_FOUT.write(out_str+'\n')
    LOG_FOUT.flush()
    print(out_str)


def get_learning_rate(batch):
    learning_rate = tf.train.exponential_decay(
                        BASE_LEARNING_RATE,  # Base learning rate.
                        batch * BATCH_SIZE,  # Current index into the dataset.
                        DECAY_STEP,          # Decay step.
                        DECAY_RATE,          # Decay rate.
                        staircase=True)
    learning_rate = tf.maximum(learning_rate, 0.00001) # CLIP THE LEARNING RATE!
    return learning_rate        

def get_bn_decay(batch):
    bn_momentum = tf.train.exponential_decay(
                      BN_INIT_DECAY,
                      batch*BATCH_SIZE,
                      BN_DECAY_DECAY_STEP,
                      BN_DECAY_DECAY_RATE,
                      staircase=True)
    bn_decay = tf.minimum(BN_DECAY_CLIP, 1 - bn_momentum)
    return bn_decay

def train():
    with tf.Graph().as_default():
        if (str(type(GPU_INDEX)) == "<class 'str'>"): 
            devices = '/gpu:'+str(GPU_INDEX)
        elif (str(type(GPU_INDEX)) == "<class 'list'>"):
            for GPUS in GPU_INDEX: 
                if 'devices' in locals():
                    devices = devices+'/gpu:'+str(GPUS)
                elif 'devices' not in locals():
                    devices = '/gpu:'+str(GPUS)
            
        else: 
            devices = '/gpu: 0'
        with tf.device(devices):
            pointclouds_pl, labels_pl = MODEL.placeholder_inputs(BATCH_SIZE, NUM_POINT)
            is_training_pl = tf.placeholder(tf.bool, shape=())
            print(is_training_pl)
            
            # Note the global_step=batch parameter to minimize. 
            # That tells the optimizer to helpfully increment the 'batch' parameter for you every time it trains.
            batch = tf.Variable(0)
            bn_decay = get_bn_decay(batch)
            tf.summary.scalar('bn_decay', bn_decay)

            # Get model and loss 
            pred, end_points = MODEL.get_model(pointclouds_pl, is_training_pl, bn_decay=bn_decay)
            loss = MODEL.get_loss(pred, labels_pl, end_points)
            tf.summary.scalar('loss', loss)

            correct = tf.equal(tf.argmax(pred, 1), tf.to_int64(labels_pl))
            accuracy = tf.reduce_sum(tf.cast(correct, tf.float32)) / float(BATCH_SIZE)
            tf.summary.scalar('accuracy', accuracy)

            # Get training operator
            learning_rate = get_learning_rate(batch)
            tf.summary.scalar('learning_rate', learning_rate)
            if OPTIMIZER == 'momentum':
                optimizer = tf.train.MomentumOptimizer(learning_rate, momentum=MOMENTUM)
            elif OPTIMIZER == 'adam':
                optimizer = tf.train.AdamOptimizer(learning_rate)
            train_op = optimizer.minimize(loss, global_step=batch)
            
            # Add ops to save and restore all the variables.
            saver = tf.train.Saver()
            
        # Create a session
        config = tf.ConfigProto()
        config.gpu_options.allow_growth = True
        config.allow_soft_placement = True
        config.log_device_placement = False
        sess = tf.Session(config=config)

        # Add summary writers
        #merged = tf.merge_all_summaries()
        merged = tf.summary.merge_all()
        train_writer = tf.summary.FileWriter(os.path.join(LOG_DIR, 'train'),
                                  sess.graph)
        test_writer = tf.summary.FileWriter(os.path.join(LOG_DIR, 'test'))

        # Init variables
        init = tf.global_variables_initializer()
        # To fix the bug introduced in TF 0.12.1 as in
        # http://stackoverflow.com/questions/41543774/invalidargumenterror-for-tensor-bool-tensorflow-0-12-1
        #sess.run(init)
        sess.run(init, {is_training_pl: True})

        ops = {'pointclouds_pl': pointclouds_pl,
               'labels_pl': labels_pl,
               'is_training_pl': is_training_pl,
               'pred': pred,
               'loss': loss,
               'train_op': train_op,
               'merged': merged,
               'step': batch}

        for epoch in range(MAX_EPOCH):
            log_string('**** EPOCH %03d ****' % (epoch))
            sys.stdout.flush()
             
            train_one_epoch(sess, ops, train_writer)
            eval_one_epoch(sess, ops, test_writer)
            
            # Save the variables to disk.
            if epoch % 10 == 0:
                save_path = saver.save(sess, os.path.join(LOG_DIR, "model.ckpt"))
                log_string("Model saved in file: %s" % save_path)



def train_one_epoch(sess, ops, train_writer):
    """ ops: dict mapping from string to tf ops """
    is_training = True
    
    # Shuffle train files
    train_file_idxs = np.arange(0, len(TRAIN_FILES))
    np.random.shuffle(train_file_idxs)
    
    for fn in range(len(TRAIN_FILES)):
        log_string('----' + str(fn) + '-----')
        current_data, current_label = provider.loadDataFile(TRAIN_FILES[train_file_idxs[fn]])
        current_data = current_data[:,0:NUM_POINT,:]
        current_data, current_label, _ = provider.shuffle_data(current_data, np.squeeze(current_label))            
        current_label = np.squeeze(current_label)
        
        file_size = current_data.shape[0]
        num_batches = file_size // BATCH_SIZE
        
        total_correct = 0
        total_seen = 0
        loss_sum = 0
       
        for batch_idx in range(num_batches):
            start_idx = batch_idx * BATCH_SIZE
            end_idx = (batch_idx+1) * BATCH_SIZE
            
            # Augment batched point clouds by rotation and jittering
            rotated_data = provider.rotate_point_cloud(current_data[start_idx:end_idx, :, :])
            jittered_data = provider.jitter_point_cloud(rotated_data)
            feed_dict = {ops['pointclouds_pl']: jittered_data,
                         ops['labels_pl']: current_label[start_idx:end_idx],
                         ops['is_training_pl']: is_training,}
            summary, step, _, loss_val, pred_val = sess.run([ops['merged'], ops['step'],
                ops['train_op'], ops['loss'], ops['pred']], feed_dict=feed_dict)
            train_writer.add_summary(summary, step)
            pred_val = np.argmax(pred_val, 1)
            correct = np.sum(pred_val == current_label[start_idx:end_idx])
            total_correct += correct
            total_seen += BATCH_SIZE
            loss_sum += loss_val
        
        log_string('mean loss: %f' % (loss_sum / float(num_batches)))
        log_string('accuracy: %f' % (total_correct / float(total_seen)))

        
def eval_one_epoch(sess, ops, test_writer):
    """ ops: dict mapping from string to tf ops """
    is_training = False
    total_correct = 0
    total_seen = 0
    loss_sum = 0
    total_seen_class = [0 for _ in range(NUM_CLASSES)]
    total_correct_class = [0 for _ in range(NUM_CLASSES)]
    
    for fn in range(len(TEST_FILES)):
        log_string('----' + str(fn) + '-----')
        current_data, current_label = provider.loadDataFile(TEST_FILES[fn])
        current_data = current_data[:,0:NUM_POINT,:]
        current_label = np.squeeze(current_label)
        
        file_size = current_data.shape[0]
        num_batches = file_size // BATCH_SIZE
        
        for batch_idx in range(num_batches):
            start_idx = batch_idx * BATCH_SIZE
            end_idx = (batch_idx+1) * BATCH_SIZE

            feed_dict = {ops['pointclouds_pl']: current_data[start_idx:end_idx, :, :],
                         ops['labels_pl']: current_label[start_idx:end_idx],
                         ops['is_training_pl']: is_training}
            summary, step, loss_val, pred_val = sess.run([ops['merged'], ops['step'],
                ops['loss'], ops['pred']], feed_dict=feed_dict)
            pred_val = np.argmax(pred_val, 1)
            correct = np.sum(pred_val == current_label[start_idx:end_idx])
            total_correct += correct
            total_seen += BATCH_SIZE
            loss_sum += (loss_val*BATCH_SIZE)
            for i in range(start_idx, end_idx):
                l = current_label[i]
                total_seen_class[l] += 1
                total_correct_class[l] += (pred_val[i-start_idx] == l)
            
    log_string('eval mean loss: %f' % (loss_sum / float(total_seen)))
    log_string('eval accuracy: %f'% (total_correct / float(total_seen)))
    log_string('eval avg class acc: %f' % (np.mean(np.array(total_correct_class)/np.array(total_seen_class,dtype=np.float))))
         


if __name__ == "__main__":
    train()
    LOG_FOUT.close()