Rstudio Crashes: devtools::document() or devtools::check()

[paternogbc]

I have managed to capture the log files from Rstudio regarding the previous issue (#1563)
Also I checked both functions (check and document) on R console outside Rstudio and they work just fine.

Let me know if I can provide any additional information.

rsession-paterno:

01 Aug 2017 11:57:47 [rsession-paterno] ERROR Parent terminated; LOGGED FROM: void {anonymous}::detectParentTermination() /home/ubuntu/rstudio/src/cpp/session/SessionMain.cpp:1238
04 Aug 2017 19:56:25 [rsession-paterno] WARNING Process supervisor did not terminate within 1 second; LOGGED FROM: void {anonymous}::rCleanup(bool) /home/ubuntu/rstudio/src/cpp/session/SessionMain.cpp:1098
16 Aug 2017 01:46:21 [rsession-paterno] ERROR Parent terminated; LOGGED FROM: void {anonymous}::detectParentTermination() /home/ubuntu/rstudio/src/cpp/session/SessionMain.cpp:1238

rdesktop.log

03 Aug 2017 10:33:07 [rdesktop] ERROR system error 104 (Connection reset by peer); OCCURRED AT: void rstudio::core::http::AsyncClient::handleReadStatusLine(const rstudio_boost::system::error_code&) [with SocketService = rstudio_boost::asio::basic_stream_socket<rstudio_boost::asio::local::stream_protocol>] /home/ubuntu/rstudio/src/cpp/core/include/core/http/AsyncClient.hpp:363; LOGGED FROM: void rstudio::desktop::NetworkReply::onError(const rstudio::core::Error&) /home/ubuntu/rstudio/src/cpp/desktop/DesktopNetworkReply.cpp:288

[hadley]

@kevinushey any ideas?

[kevinushey]

@paternogbc can you replicate the crash outside of RStudio (e.g. in RGui.exe or similar)?

[paternogbc]

Hi @kevinushey ,

I am running LINUX but there is no crash outside Rstudio. When using R outside Rstudio, devtools functions works just fine. I am not sure if that was what you asked. I can also try to install and do some testing in a virtual machine with Windows or other Linux distributions.

Also, when running the commands document() or check() with the Rstudio GUI panel, it also works fine. Is just when using these commands at the console that Rstudio crashes.

Let me know how I can help.

[jimhester]

I am not sure of the cause of this, but it would be useful to know if it occurs only with the CRAN version of devtools, or with the development version. Also if does this crash occur when developing any package or only specific packages?

[micdonato]

I am having the same problem.

Whenever I run devtools::document() or devtools::check() RStudio crashes.

Nothing seems to be saved in the logs.

The only thing I get is the "bomb" message ("R session aborted, fatal error, yadda yadda").

If I run check from the RStudio panel I get the following error, but I can't identify what I am missing.

==> devtools::document(roclets=c('rd', 'collate', 'namespace'))


 *** caught segfault ***
address 0x18, cause 'memory not mapped'

Traceback:
 1: dyn.load(file, DLLpath = DLLpath, ...)
 2: library.dynam(lib, package, package.lib)
 3: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
 4: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),     versionCheck = vI[[i]]), from = package)
 5: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]])
 6: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()),     versionCheck = vI[[i]]), from = package)
 7: loadNamespace(package, ...)
 8: doTryCatch(return(expr), name, parentenv, handler)
 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: tryCatchList(expr, classes, parentenv, handlers)
11: tryCatch(loadNamespace(package, ...), error = function(e) e)
12: requireNamespace(dep_name, quietly = TRUE)
13: check_dep_version(package, version)
14: pkgload::check_suggested(package = package, version = version,     compare = compare, path = path)
15: check_suggested("roxygen2")
16: devtools::document(roclets = c("rd", "collate", "namespace"))
17: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage"))
18: suppressPackageStartupMessages({    oldLC <- Sys.getlocale(category = "LC_COLLATE")    Sys.setlocale(category = "LC_COLLATE", locale = "C")    on.exit(Sys.setlocale(category = "LC_COLLATE", locale = oldLC))    devtools::document(roclets = c("rd", "collate", "namespace"))})
An irrecoverable exception occurred. R is aborting now ...

Exited with status 11.

roxygen2 is installed
devtools is installed from github

[jimhester]

We would need more information to determine the case, particularly what package you are trying to develop.

[lock]

This old issue has been automatically locked. If you believe you have found a related problem, please file a new issue (with reprex) and link to this issue. https://reprex.tidyverse.org/