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read_ncdf refactor and improvements #205

Merged
merged 43 commits into from
Aug 12, 2019
Merged

read_ncdf refactor and improvements #205

merged 43 commits into from
Aug 12, 2019

Commits on Apr 24, 2019

  1. first stab at tidync stars_proxy

    @mdsumner
    mdsumner committed Apr 24, 2019
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  2. remove functions that duplicate ncmeta funcionality

    @dblodgett-usgs
    dblodgett-usgs committed Apr 24, 2019
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Commits on Apr 28, 2019

  1. Merge branch 'master' into mdsumner-dev

    @mdsumner
    mdsumner committed Apr 28, 2019
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  2. integrate dblodgett's PR 

    Merge branch 'master' of https://github.com/dblodgett-usgs/stars into dblodgett-usgs-master

# Conflicts:
#	R/ncdf.R
    @mdsumner
    mdsumner committed Apr 28, 2019
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  3. Merge branch 'dblodgett-usgs-master' into dblodgett

    @mdsumner
    mdsumner committed Apr 28, 2019
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  4. separate time interpretation

    @mdsumner
    mdsumner committed Apr 28, 2019
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  5. more robust to units/time interpretation

    @mdsumner
    mdsumner committed Apr 28, 2019
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  6. more time robust

    @mdsumner
    mdsumner committed Apr 28, 2019
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  7. report on other available variables

    @mdsumner
    mdsumner committed Apr 28, 2019
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Commits on Apr 29, 2019

  1. get units correctly

    @mdsumner
    mdsumner committed Apr 29, 2019
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  2. fix tests, pass check, include tidync suggests

    @mdsumner
    mdsumner committed Apr 29, 2019
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  3. handle NC_CHAR by conversion to array of character

    @mdsumner
    mdsumner committed Apr 29, 2019
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  4. get time no matter what it's called (via ncmeta::nc_coord_var)

    @mdsumner
    mdsumner committed Apr 29, 2019
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  5. make_time_cal2 (WIP to consolidate)

    @mdsumner
    mdsumner committed Apr 29, 2019
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  6. read_stars_tidync now has dimension and variable units 

    read_ncdf now has dimension-time units and variable units  (still need dimension units)
    @mdsumner
    mdsumner committed Apr 29, 2019
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  7. curvilinear coords for read_stars_tidync

    @mdsumner
    mdsumner committed Apr 29, 2019
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Commits on May 2, 2019

  1. curvi coords

    @mdsumner
    mdsumner committed May 2, 2019
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Commits on May 3, 2019

  1. Merge branch 'master' into netcdf-dev

    @mdsumner
    mdsumner committed May 3, 2019
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Commits on May 4, 2019

  1. name proxy vars

    @mdsumner
    mdsumner committed May 4, 2019
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  2. fix singleton dimension creation

    @mdsumner
    mdsumner committed May 4, 2019
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  3. set empty delta with units included for singleton

    @mdsumner
    mdsumner committed May 4, 2019
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Commits on May 9, 2019

  1. sds, proxy

    @mdsumner
    mdsumner committed May 9, 2019
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  2. Merge branch 'master' into netcdf-dev

    @mdsumner
    mdsumner committed May 9, 2019
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Commits on Aug 6, 2019

  1. merge conflict with upstream master

    @dblodgett-usgs
    dblodgett-usgs committed Aug 6, 2019
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  2. tests pass

    @dblodgett-usgs
    dblodgett-usgs committed Aug 6, 2019
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  3. split ncdf_tidync out for clarity

    @dblodgett-usgs
    dblodgett-usgs committed Aug 6, 2019
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  4. remove ncmeta v0.0.3 support

    @dblodgett-usgs
    dblodgett-usgs committed Aug 6, 2019
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  5. Merge pull request #9 from dblodgett-usgs/timeseries 

    sync with master
    @mdsumner
    mdsumner committed Aug 6, 2019
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Commits on Aug 7, 2019

  1. Merge branch 'netcdf-dev' of github.com:mdsumner/stars into timeseries

    @dblodgett-usgs
    dblodgett-usgs committed Aug 7, 2019
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Commits on Aug 8, 2019

  1. Heavy refactor to follow flow and dependencies within read_ncdf

    @dblodgett-usgs
    dblodgett-usgs committed Aug 8, 2019
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  2. fixes #199 and #89

    @dblodgett-usgs
    dblodgett-usgs committed Aug 8, 2019
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Commits on Aug 9, 2019

  1. further refactor and some more test coverage

    @dblodgett-usgs
    dblodgett-usgs committed Aug 9, 2019
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  2. move ncdf_tidync file out of R and a little cleanup

    @dblodgett-usgs
    dblodgett-usgs committed Aug 9, 2019
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  3. handle non-canonical axis order for curvilinear case

    @dblodgett-usgs
    dblodgett-usgs committed Aug 9, 2019
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  4. rasterwise robust

    @dblodgett-usgs
    dblodgett-usgs committed Aug 9, 2019
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  5. Merge branch 'master' of github.com:r-spatial/stars into timeseries

    @dblodgett-usgs
    dblodgett-usgs committed Aug 9, 2019
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Commits on Aug 10, 2019

  1. make vignette pass check

    @edzer
    edzer committed Aug 10, 2019
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Commits on Aug 11, 2019

  1. minor change to future proof

    @dblodgett-usgs
    dblodgett-usgs committed Aug 11, 2019
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  2. Merge branch 'dblodgett-usgs-timeseries' of github.com:r-spatial/star… 

    …s into timeseries
    @dblodgett-usgs
    dblodgett-usgs committed Aug 11, 2019
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  3. Merge branch 'master' of github.com:r-spatial/stars into timeseries

    @dblodgett-usgs
    dblodgett-usgs committed Aug 11, 2019
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  4. test fixes based on recent work on units handling

    @dblodgett-usgs
    dblodgett-usgs committed Aug 11, 2019
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  5. curvilinear cleanup

    @dblodgett-usgs
    dblodgett-usgs committed Aug 11, 2019
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Commits on Aug 12, 2019

  1. more curvilinear clean up and change aperm to t.

    @dblodgett-usgs
    dblodgett-usgs committed Aug 12, 2019
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