Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Compilation error with gcc-5.1.1, FairRoot(v-15.07a), FairSoft(jul15p1) #4

Closed
micherciu opened this issue Oct 1, 2015 · 7 comments
Closed

Compilation error with gcc-5.1.1, FairRoot(v-15.07a), FairSoft(jul15p1) #4

micherciu opened this issue Oct 1, 2015 · 7 comments

Comments

@micherciu
Copy link

Hello,

Within this configuration, master or dev of R3BRoot (jul15) doesn't compile ... does it support ROOT 5 ?!

[ 39%] Built target R3BGfi
[ 39%] Built target libR3BGfi.rootmap
[ 41%] Built target R3BLandDB
[ 41%] Building CXX object land/CMakeFiles/R3BLand.dir/G__R3BLandDict.cxx.o
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0, fromPATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘ROOT::TGenericClassInfo* ROOTDict::GenerateInitInstanceLocal(const std::vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>)’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4435:68: error: within this context
static ROOT::TGenericClassInfo *GenerateInitInstanceLocal(const vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>)
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4437:7: error: within this context
vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit> ptr = 0;
^
In file included fromPATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4438:69: error: within this context
static ::TVirtualIsAProxy isa_proxy = new ::TIsAProxy(typeid(vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>),0);
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4441:26: error: within this context
typeid(vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>), ::ROOT::DefineBehavior(ptr, ptr),
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4443:26: error: within this context
sizeof(vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>) );
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4449:112: error: within this context
instance.AdoptCollectionProxyInfo( ::ROOT::TCollectionProxyInfo::Generate( ::ROOT::TCollectionProxyInfo::Pushback< vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit> >()));
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: At global scope:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit

PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4453:91: error: within this context
static ::ROOT::TGenericClassInfo _R__UNIQUE(Init) = GenerateInitInstanceLocal((const vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>)0x0); R__UseDummy(R__UNIQUE(Init));
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘void ROOTDict::vectorlER3BLandDigitizer_CFDcLcLR3BLandDigitizer_CFD_Paddle_HitgR_Dictionary()’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4457:52: error: within this context
::ROOTDict::GenerateInitInstanceLocal((const vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>)0x0)->GetClass();
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘void_ ROOTDict::new_vectorlER3BLandDigitizer_CFDcLcLR3BLandDigitizer_CFD_Paddle_HitgR(void_)’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4465:57: error: within this context
return p ? ::new((::ROOT::TOperatorNewHelper_)p) vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit> : new vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>;
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4465:125: error: within this context
return p ? ::new((::ROOT::TOperatorNewHelper_)p) vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit> : new vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>;
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘void_ ROOTDict::newArray_vectorlER3BLandDigitizer_CFDcLcLR3BLandDigitizer_CFD_Paddle_HitgR(Long_t, void_)’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4468:56: error: within this context
return p ? ::new((::ROOT::TOperatorNewHelper_)p) vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>[nElements] : new vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>[nElements];
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4468:135: error: within this context
return p ? ::new((::ROOT::TOperatorNewHelper_)p) vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>[nElements] : new vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>[nElements];
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘void ROOTDict::delete_vectorlER3BLandDigitizer_CFDcLcLR3BLandDigitizer_CFD_Paddle_HitgR(void_)’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4472:16: error: within this context
delete ((vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit>)p);
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘void ROOTDict::deleteArray_vectorlER3BLandDigitizer_CFDcLcLR3BLandDigitizer_CFD_Paddle_HitgR(void)’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4475:19: error: within this context
delete ;
^
In file included from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.h:46:0,
from PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:17:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h: In function ‘void ROOTDict::destruct_vectorlER3BLandDigitizer_CFDcLcLR3BLandDigitizer_CFD_Paddle_HitgR(void_)’:
PATH_TO_WORK/GSI/R3BRoot/source/land/R3BLandDigitizer_CFD.h:58:9: error: ‘struct R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit’ is protected
struct R3BLandDigitizer_CFD_Paddle_Hit
^
PATH_TO_WORK/GSI/R3BRoot/build/land/G__R3BLandDict.cxx:4478:15: error: within this context
typedef vector<R3BLandDigitizer_CFD::R3BLandDigitizer_CFD_Paddle_Hit> current_t;
^
land/CMakeFiles/R3BLand.dir/build.make:827: recipe for target 'land/CMakeFiles/R3BLand.dir/G__R3BLandDict.cxx.o' failed
make[2]: *_* [land/CMakeFiles/R3BLand.dir/G__R3BLandDict.cxx.o] Error 1
CMakeFiles/Makefile2:1521: recipe for target 'land/CMakeFiles/R3BLand.dir/all' failed
make[1]: *** [land/CMakeFiles/R3BLand.dir/all] Error 2
Makefile:126: recipe for target 'all' failed
make: *** [all] Error 2
@kresan
Copy link
Contributor

kresan commented Oct 1, 2015

Hello,

R3BRoot is currently not compatible with gcc 5.x
I will resolve this issue next week.

Best regards,
Dima

@kresan
Copy link
Contributor

kresan commented Oct 7, 2015

Hello Madalin,

unfortunately I can not reproduce your problem. Which version of R3BRoot do you mean? And version of ROOT? Your compilation error is looking like you are compiling master branch with ROOT 6. But your issue description states different.

@micherciu
Copy link
Author

Hi Dima,

I checked again the configuration and I use FairRoot (v-15.07a), FairSoft (jul15p1, without compilation of ROOT6, just ROOT5) and the recent R3BRoot tag(42f919c) - I quess jul15.

Best regards

@kresan
Copy link
Contributor

kresan commented Oct 7, 2015

Could you try with dev branch, please.

Cheers,
Dima

@micherciu
Copy link
Author

Unfortunately, the same error exist ...

@micherciu
Copy link
Author

probably this may help ... the configuration file for R3BRoot I have ...

-- The C compiler identification is GNU 5.1.1
-- The CXX compiler identification is GNU 5.1.1
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/g++
-- Check for working CXX compiler: /usr/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- NOT Found FAIRBASE
-- Setting FairRoot environment…
-- FairRoot ... - found Madalin/root/GSI/FairRoot/install
-- FairRoot Library directory : Madalin/root/GSI/FairRoot/install/lib
-- FairRoot Include path… : Madalin/root/GSI/FairRoot/install/include
-- FairRoot Cmake Modules : Madalin/root/GSI/FairRoot/install/share/fairbase/cmake
-- Performing Test _HAS_CXX11_FLAG
-- Performing Test _HAS_CXX11_FLAG - Success
-- Checking C++11 support for "func"
-- Checking C++11 support for "func": works
-- Checking C++11 support for "auto"
-- Checking C++11 support for "auto": works
-- Checking C++11 support for "auto_ret_type"
-- Checking C++11 support for "auto_ret_type": works
-- Checking C++11 support for "class_override_final"
-- Checking C++11 support for "class_override_final": not supported
-- Checking C++11 support for "constexpr"
-- Checking C++11 support for "constexpr": works
-- Checking C++11 support for "constructor-delegation"
-- Checking C++11 support for "constructor-delegation": works
-- Checking C++11 support for "cstdint"
-- Checking C++11 support for "cstdint": works
-- Checking C++11 support for "decltype"
-- Checking C++11 support for "decltype": works
-- Checking C++11 support for "initializer_list"
-- Checking C++11 support for "initializer_list": works
-- Checking C++11 support for "lambda"
-- Checking C++11 support for "lambda": works
-- Checking C++11 support for "long_long"
-- Checking C++11 support for "long_long": works
-- Checking C++11 support for "nullptr"
-- Checking C++11 support for "nullptr": works
-- Checking C++11 support for "regex"
-- Checking C++11 support for "regex": works
-- Checking C++11 support for "rvalue-references"
-- Checking C++11 support for "rvalue-references": works
-- Checking C++11 support for "sizeof_member"
-- Checking C++11 support for "sizeof_member": works
-- Checking C++11 support for "static_assert"
-- Checking C++11 support for "static_assert": works
-- Checking C++11 support for "variadic_templates"
-- Checking C++11 support for "variadic_templates": works
-- Checking C++11 support for "sharedpointer"
^[[B-- Checking C++11 support for "sharedpointer": works
-- fairsoft-config found
--- Found a Linux ssytem
--- Found GNU compiler collection
--- Build Type: RelWithDebInfo
--- Compiler Flags: -std=c++11
-- Looking for Boost ...
-- Boost version: 1.58.0
-- Found the following Boost libraries:
-- thread
-- system
-- timer
-- program_options
Building without dbase ...
-- Looking for Root...
-- Looking for Root... - Found Madalin/root/GSI/Fairsoft/jul15p1/build/bin/root
-- Looking for Root... - Found version is 5.34/33
-- Looking for GEANT3...
-- Looking for GEANT3... - found Madalin/root/GSI/Fairsoft/jul15p1/build/lib64/libgeant321.so
-- Looking for GEANT4...
-- Looking for GEANT4... - found Madalin/root/GSI/Fairsoft/jul15p1/build/lib
-- Looking for GEANT4 DATA files...
-- Found G4EMLOW data
-- Found PhotonEvaporation data
-- Found G4NDL data
-- Found G4NEUTRONXS data
-- Found G4PII data
-- Found RadioactiveDecay data
-- Found RealSurface data
-- Found G4SAID data
-- Looking for GEANT4VMC...
-- Looking for GEANT4VMC... - found Madalin/root/GSI/Fairsoft/jul15p1/build/lib
-- Looking for VGM...
-- Looking for VGM... - found Madalin/root/GSI/Fairsoft/jul15p1/build/lib
-- Looking for CLHEP...
-- Looking for CLHEP... - found Madalin/root/GSI/Fairsoft/jul15p1/build/lib
-- Looking for Java...
-- Could NOT find Java (missing: Java_JAR_EXECUTABLE Java_JAVAC_EXECUTABLE Java_JAVAH_EXECUTABLE Java_JAVADOC_EXECUTABLE) (found version "1.8.0.51")
-- Looking for Java... - found /usr/bin/java
-- Looking for Perl...
-- Found Perl: /usr/bin/perl (found version "5.20.2")
-- Looking for Perl... - found /usr/bin/perl
-- Looking for Rule Checker...
-- Looking for Rule Checker... - No Rules found
-- Looking for Rule Checker... - Not found
running /bin/chmod u+x Madalin/root/GSI/R3BRoot/build/macros/r3b/r3bsim.sh 2>&1
running /bin/chmod u+x Madalin/root/GSI/R3BRoot/build/macros/r3b/califa/califasim.sh 2>&1
running /bin/chmod u+x Madalin/root/GSI/R3BRoot/build/macros/elise/elsim.sh 2>&1
Build the eventdisplay.
-- Configuring done
-- Generating done

@micherciu
Copy link
Author

after a correct switch to dev branch:
git checkout branch dev
and
git pull origin dev

now it compiled ok ... thank you

@kresan kresan closed this as completed Oct 7, 2015
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
2 participants
@kresan @micherciu