Merge 6c93cd2 into e2362fe

.readthedocs.yml

@@ -0,0 +1,13 @@
+version: 2
+
+build:
+  image: latest
+
+# Install regular dependencies.
+python:
+  version: 3.7
+  install:
+    - method: pip
+      path: .
+      extra_requirements:
+        - docs

.travis.yml

@@ -1,81 +1,59 @@
-language: c
+language: python
 
 # The apt packages below are needed for sphinx builds, which can no longer
 # be installed with sudo apt-get.
 addons:
     apt:
         packages:
             - graphviz
-            - texlive-latex-extra
-            - dvipng
             - libgfortran3  # for casatools
 
 env:
     global:
         # The following versions are the 'default' for tests, unless
         # overidden underneath. They are defined here in order to save having
         # to repeat them for all configurations.
-        - PYTHON_VERSION=3.6
-        - SETUP_CMD='test'
-        - NUMPY_VERSION=stable
-        - ASTROPY_VERSION=stable
-          # matplotlib>2 is an install requirement of pvextractor, so we may as
-          # well include it here
-        - CONDA_DEPENDENCIES='matplotlib sip glue-core scipy'
-        - CONDA_CHANNELS='astropy glueviz'
-        - PVEXTRACTOR="https://github.com/radio-astro-tools/pvextractor/archive/master.zip"
-        - REGIONS="https://github.com/astropy/regions/archive/master.zip"
-          # lock to reproject v0.5.1: master branch acquired serious regressions in #166
-        - REPROJECT="https://github.com/astropy/reproject/archive/v0.5.1.tar.gz"
-        - RADIOBEAM="https://github.com/radio-astro-tools/radio-beam/archive/master.zip"
-        - PIP_DEPENDENCIES="Cython $PVEXTRACTOR $RADIOBEAM $REGIONS $REPROJECT"
         - SETUP_XVFB=True
         - ON_TRAVIS=True
-        - INSTALL_CASA=False
+        - TOXENV=''
+        - TOXARGS=''
+        - TOXPOSARGS=''
 
 matrix:
     include:
-        - env: SETUP_CMD='egg_info'
 
-        # Test with development versions
-        - env: PYTHON_VERSION=3.7 ASTROPY_VERSION='development'
-          name: py37_astropy-dev
+        - python: 3.7
+          env: TOXENV='py37-test'
+          name: "Python 3.7 with minimal dependencies"
 
-        # Do a coverage test in Python 3.
-        # make sure *everything* is run for coverage tests
-        ## COVERAGE TESTS DISABLED: they don't work any more.  I have found no combination of anything that fixes this.
-        - env: SETUP_CMD='test --coverage'
-               CONDA_DEPENDENCIES='matplotlib yt bottleneck sip aplpy joblib glue-core scipy'
-               INSTALL_CASA=True
-          name: coverage
+        - python: 3.7
+          env: TOXENV='py37-test-all'
+          name: "Python 3.7 with all dependencies (except CASA)"
 
-        # Check for sphinx doc build warnings - we do this first because it
-        # may run for a long time.
-        - env: SETUP_CMD='build_sphinx -w' NUMPY_VERSION=1.16
-               PIP_DEPENDENCIES="Cython $PVEXTRACTOR $RADIOBEAM $REGIONS $REPROJECT sphinx-astropy"
-          name: docs
+        - python: 3.6
+          env: TOXENV='py36-test-casa'
+          name: "Python 3.6 with minimal dependencies and CASA"
 
+        - python: 3.8
+          env: TOXENV='py38-test-all-dev'
+          name: "Python 3.8, all dependencies, and dev versions of key dependencies"
 
-        - env: ASTROPY_VERSION='development'
-          name: astropy-dev
+        - python: 3.8
+          env: TOXENV='build_docs'
+          name: "Documentation"
 
-        - env: CONDA_DEPENDENCIES="matplotlib=3 aplpy yt bottleneck joblib $CONDA_DEPENDENCIES"
-               ASTROPY_VERSION='development'
-          name: vistools
-
-        - env: # separate joblib-only test
-               CONDA_DEPENDENCIES="joblib $CONDA_DEPENDENCIES"
-               ASTROPY_VERSION='development'
-          name: joblib
-
-
-install:
-    - git clone git://github.com/astropy/ci-helpers.git
-    - source ci-helpers/travis/setup_conda.sh
-    - if [[ $INSTALL_CASA == True ]]; then pip install --progress-bar off --extra-index-url https://casa-pip.nrao.edu/repository/pypi-group/simple casatools casatasks; fi
+before_install:
+    # We need a full clone to make sure setuptools_scm
+    # works properly
+    - git fetch --unshallow .
+    - git fetch --depth=1000000
 
 script:
-    - python setup.py $SETUP_CMD
+    - pip install tox
+    - tox $TOXARGS -- $TOXPOSARGS
 
 after_success:
-    - if [[ $SETUP_CMD == 'test --coverage' ]]; then coveralls --rcfile='spectral_cube/tests/coveragerc'; fi
+    - pip install coveralls coverage
+    - coverage combine .tmp/*/.coverage
+    - coverage report
+    - coveralls

CHANGES.rst

@@ -4,6 +4,8 @@
 - Refactor tests to use fixtures for accessing data instead of needing to
   run a script to generate test files. #598
 
+- Refactor package infrastructure to no longer use astropy-helpers. #599
+
 0.4.5 (unreleased)
 ------------------
  - Added support for casatools-based io in #541 and beam reading from CASA

MANIFEST.in

@@ -1,9 +1,7 @@
 include README.md
 include CHANGES.rst
 include LICENSE.rst
-
-include ez_setup.py
-include ah_bootstrap.py
+include pyproject.toml
 include setup.cfg
 
 recursive-include *.pyx *.c *.pxd
@@ -16,8 +14,4 @@ prune build
 prune docs/_build
 prune docs/api
 
-recursive-include astropy_helpers *
-exclude astropy_helpers/.git
-exclude astropy_helpers/.gitignore
-
 global-exclude *.pyc *.o

README.rst

@@ -0,0 +1,40 @@
+About
+=====
+
+|Join the chat at https://gitter.im/radio-astro-tools/spectral-cube|
+
+This package aims to facilitate the reading, writing, manipulation, and
+analysis of spectral data cubes. More information is available in the
+documentation, avaliable `online at
+readthedocs.org <http://spectral-cube.rtfd.org>`__.
+
+.. figure:: http://img.shields.io/badge/powered%20by-AstroPy-orange.svg?style=flat
+   :alt: Powered by Astropy Badge
+
+   Powered by Astropy Badge
+
+Credits
+=======
+
+This package is developed by:
+
+-  Chris Beaumont ([@ChrisBeaumont](http://github.com/ChrisBeaumont))
+-  Adam Ginsburg ([@keflavich](http://github.com/keflavich))
+-  Adam Leroy ([@akleroy](http://github.com/akleroy))
+-  Thomas Robitaille ([@astrofrog](http://github.com/astrofrog))
+-  Erik Rosolowsky ([@low-sky](http://github.com/low-sky))
+-  Eric Koch ([@e-koch](https://github.com/e-koch))
+
+Build and coverage status
+=========================
+
+|Build Status| |Coverage Status| |DOI|
+
+.. |Join the chat at https://gitter.im/radio-astro-tools/spectral-cube| image:: https://badges.gitter.im/Join%20Chat.svg
+   :target: https://gitter.im/radio-astro-tools/spectral-cube?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge
+.. |Build Status| image:: https://travis-ci.org/radio-astro-tools/spectral-cube.png?branch=master
+   :target: https://travis-ci.org/radio-astro-tools/spectral-cube
+.. |Coverage Status| image:: https://coveralls.io/repos/radio-astro-tools/spectral-cube/badge.svg?branch=master
+   :target: https://coveralls.io/r/radio-astro-tools/spectral-cube?branch=master
+.. |DOI| image:: https://zenodo.org/badge/doi/10.5281/zenodo.11485.png
+   :target: http://dx.doi.org/10.5281/zenodo.11485