Merge pull request #651 from radis/remove_python39_limit

No upper version limit in RADIS install

environment.yml

@@ -5,7 +5,7 @@ channels:
 - astropy
 - plotly
 dependencies:
-- python=3.8  # Needed by vaex 4.17 - https://github.com/vaexio/vaex/issues/2397
+- python
 - astropy>=4.3.1  # Unit aware calculations
 - astroquery>=0.4.6  # to fetch HITRAN databases
 - beautifulsoup4>=4.10.0 # parse ExoMol website

examples/2_Experimental_spectra/plot_fit_lineshape.py

@@ -40,14 +40,18 @@
         pressure=1,  # bar
         Tgas=T_ref,
         mole_fraction=1,
+        path_length=4,
         wstep=0.001,
         databank="hitemp",
         verbose=False,
     )
     w, A = s.get("absorbance")  # extract the wavenumber and absorbance
-    noise_amplitude = 5e-3
+    noise_amplitude = 5e-2
+    rng1 = np.random.default_rng(
+        122807528840384100672342137672332424406
+    )  # to make sure the fit provides the same output each time
     noise = (
-        noise_amplitude * np.random.rand(np.size(A)) - noise_amplitude / 2
+        noise_amplitude * rng1.random(np.size(A)) - noise_amplitude / 2
     )  # simulates the noise of an experiment
     s = Spectrum.from_array(
         w,
@@ -62,7 +66,9 @@
 list_models = [models.Voigt1D() for _ in range(3)]
 
 verbose = False  # verbose=True also recommended
-gfit, y_err = s.fit_model(list_models, confidence=0.9545, plot=True, verbose=verbose)
+gfit, y_err = s.fit_model(
+    list_models, confidence=0.9545, plot=True, verbose=verbose, debug=False
+)
 if verbose:
     for mod in gfit:
         print(mod)

radis/test/spectrum/test_operations.py

@@ -302,7 +302,7 @@ def test_dimensioned_operations(*args, **kwargs):
     assert u.Unit(s.units["radiance"]) == u.Unit(
         "mW/cm2/sr/nm"
     )  # check units are valid
-    assert s.units["radiance"] == "mW / (cm2 nm sr)"  # check units have been simplified
+    assert s.units["radiance"] == "mW / (nm sr cm2)"  # check units have been simplified
 
 
 @pytest.mark.fast

requirements.txt

@@ -1,7 +1,7 @@
 # Installed by "pip install -e .[dev]" as well as "conda env create --file environment.yml"
 lxml           # parser used for ExoMol website
 hjson          # Json with comments (for default_radis.json)
-publib>=0.3.2  # Plotting styles for Matplotlib. Version, update to 0.4.0 needed for matplotlib==3.8. However, only 0.3.2 is compatible with python==3.8 (see #647)
+publib>=0.4  # Plotting styles for Matplotlib. Version, update to 0.4.0 needed for matplotlib==3.8. However, only 0.3.2 is compatible with python==3.8 (see #647)
 hitran-api     # HAPI, used to access TIPS partition functions
 peakutils
 ruamel.yaml

setup.py

@@ -246,7 +246,6 @@ def run_setup(with_binary):
         ],
         packages=find_packages(),
         install_requires=[],
-        python_requires="<3.9",  # this limit is introduced by vaex, see https://github.com/radis/radis/pull/647
         # do not add requirements here, add them directly in the requirements.txt file
         # note EP : generate a requirement.txt by Mamba & pip freeze for Pypi deployment ? see https://stackoverflow.com/a/75239980/5622825
         extras_require={