Merge pull request #47 from radlfabs/44-readme-code-fails #80

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

	name: tests

	on:
	push:
	branches: [ main ]
	pull_request:
	branches: [ main ]

	jobs:
	build:

	runs-on: ubuntu-latest
	environment: testing
	timeout-minutes: 15

	steps:
	- uses: actions/checkout@v3

	- name: Set up Python 3.11
	uses: actions/setup-python@v3
	with:
	python-version: 3.11

	- name: Install pip dependencies
	run: \|
	python -m pip install --upgrade pip
	pip install pytest pytest-cov
	if [ -f requirements.txt ]; then pip install -r requirements.txt; fi

	- name: Install flexcv
	run: \|
	pip install -e ".[dev]"

	- name: Set env variable
	run: echo "NEPTUNE_API_TOKEN=${{ secrets.NEPTUNE_API_TOKEN }}" >> $GITHUB_ENV

	- name: Run PyTest
	run: \|
	set -o pipefail
	pytest .. --junitxml=pytest.xml --cov-report json:cov.json --cov-report=term-missing:skip-covered --cov=flexcv test/ \| tee pytest-coverage.txt

	- name: Pytest coverage comment
	uses: MishaKav/pytest-coverage-comment@main
	with:
	github-token: ${{ secrets.GITHUB_TOKEN }}
	pytest-coverage-path: ./pytest-coverage.txt
	junitxml-path: ./pytest.xml

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