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GMMs.v1.07.txt
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GMMs.v1.07.txt
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MF0001 arabinoxylan degradation
K01209 K15921 K01181 K01198 K15531 K18205
///
MF0002 fructan degradation
K03332 K01193
///
MF0003 pectin degradation I
K01051
K01184,K01213 K18650
///
MF0004 pectine degradation II
K01051
K18650
K01728 K19551 K01731
K01730
K01815
K00874
K01625 K17463
///
MF0005 starch degradation
K01176 K07405 K05343
K01200 K01208
K00688 K16153 K00705 K01187 K15922 K01178 K01182
///
MF0006 lactose degradation
K12111 K01190 K12308
///
MF0007 lactose and galactose degradation
K02786,K02787,K02788
K01220
K01819
K00917
K08302 K01635
///
MF0008 maltose degradation
K00691
K01838
///
MF0009 melibiose degradation
K07406 K07407
///
MF0010 sucrose degradation I
K01193
K00847
///
MF0011 sucrose degradation II
K00690
K00847
K01792
K01835 K15778,K15779
///
MF0012 trehalose degradation
K03731 K01226 K01194 K05342
///
MF0013 allose degradation
K00881
K01807,K01808
///
MF0014 arabinose degradation
K01804
K00853
///
MF0015 fructose degradation
K00882
///
MF0016 fucose degradation
K02431
K01818
K00879
K01628
K01803
///
MF0017 galactose degradation
K01785
K00849
K00965
K01784 K17716
K01838
///
MF0018 mannose degradation
K01809 K15916 K16011
///
MF0019 rhamnose degradation
K03534
K01813 K01820
K00848
K01629
K01803
///
MF0020 ribose degradation
K06726
K00852
///
MF0021 xylose degradation
K01805
K00854
///
MF0022 galacturonate degradation I
K01812
K00041
K01685 K16849,K16850
K00874
K17463 K01625 K11395
///
MF0023 galacturonate degradation II
K18981
K01707
K13877 K19588
///
MF0024 phenylalanine degradation
K00832 K00812 K00813 K11358 K00817
K04103
K00146 K00129
///
MF0025 tryptophan degradation
K01667
///
MF0026 tyrosine degradation I
K00832 K00812 K00813 K11358 K00817
K00129 K00055
///
MF0027 tyrosine degradation II
K01668
///
MF0028 aspartate degradation I
K00812 K00813 K11358
///
MF0029 aspartate degradation II
K01744
///
MF0030 glutamate degradation I
K00260 K15371 K00261
K00109
K01039,K01040
K01615
///
MF0031 glutamate degradation II
K01580
///
MF0032 glutamate degradation III
K01846,K19268
K04835
///
MF0033 alanine degradation I
K01775
K00285
///
MF0034 alanine degradation II
K00814 K00259 K19244
///
MF0035 glycine degradation
K00281 K00282,K00283
K00605
K00382
///
MF0036 isoleucine degradation
K00826
K00166,K00167,K09699,K00382 K11381,K09699,K00382
K00248 K00249 K09478 K11410
K01692 K01782 K01825
K01782 K01825 K07547,K07548 K12405 K15016
K00626 K00632 K07508
///
MF0037 leucine degradation
K00826
K00166,K00167,K09699,K00382 K11381,K09699,K00382
K00249 K00253
K01968,K01969
K13766
K01640
///
MF0038 methionine degradation I
K00789
K00558 K19398 K17399
K01251
///
MF0039 methionine degradation II
K01761
///
MF0040 proline degradation
K00318,K00294 K13821
///
MF0041 valine degradation I
K00826
K00166,K00167,K09699,K00382 K11381,K09699,K00382
K00249 K00248 K09478 K11410
K01692 K01715 K01782 K01825 K13767 K15016
K05605
K00020 K01782 K01825 K07547,K07548 K12405 K15016
K00140,K00822 K00140,K13524 K00140,K07250
///
MF0042 asparagine degradation
K05597
///
MF0043 cysteine biosynthesis/homocysteine degradation
K01697 K10150
K01758
///
MF0044 cysteine degradation I
K01758 K01760 K14155
///
MF0045 cysteine degradation II
K00812 K00813 K11358
K01011
///
MF0046 glutamine degradation I
K01425
///
MF0047 glutamine degradation II
K00265,K00266
///
MF0048 serine degradation
K01752 K01753
///
MF0049 threonine degradation I
K01754 K17989
K00656
///
MF0050 threonine degradation II
K00060,K00639 K01620,K00132 K01620,K04072 K01620,K04073 K01620,K18366
///
MF0051 arginine degradation I
K01583 K01584 K01585 K02626 K01476,K01581
K10536,K12251 K01480 K01476,K01581
///
MF0052 arginine degradation II
K00673
K01484
K00840
K06447
K05526
///
MF0053 arginine degradation III
K12252
K12253
K12254
K12255
///
MF0054 arginine degradation IV
K01476
K00819,K00294 K00819,K13821 K00819,K00286 K01750
///
MF0055 arginine degradation V
K01478
K00611
K00926
///
MF0056 histidine degradation
K01745
K01712
K01468
K01479 K05603,K01458
///
MF0057 lysine degradation I
K01843
K01844,K18011
K18012
K00248
K18014
K01036 K01034,K01035
///
MF0058 lysine degradation II
K01582
///
MF0059 anaerobic fatty acid beta-oxidation
K06076
K12507
K06445
K01782
///
MF0060 glycerol degradation I
K00005
K00863
K01803
///
MF0061 glycerol degradation II
K00864
K00111,K00112,K00113
K01803
///
MF0062 glycerol degradation III
K06120,K06121,K06122
K00086
///
MF0063 glyoxylate bypass
K01647
K01681 K01682
K01637
K01638
K00024
///
MF0064 triacylglycerol degradation
K01046
K01054
///
MF0065 Bifidobacterium shunt
K01621 K01632
K00616 K13810
K00615
K01807 K01808
K01783
K01621
///
MF0066 Entner-Doudoroff pathway
K00036
K01057 K07404
K01690
K01625
///
MF0067 glycolysis (preparatory phase)
K00844 K00845
K01810 K06859 K13810 K15916
K00850 K16370
K01622 K01623 K01624 K11645 K16305 K16306
K01803
///
MF0068 glycolysis (pay-off phase)
K00134 K00150
K00927
K01834
K01689
K00873
///
MF0069 NADH:ferredoxin oxidoreductase
K00529 K15758 K15765 K18088 K18090 K18227 K18254 K18293
///
MF0070 pentose phosphate pathway (oxidative phase)
K00036 K19243
K01057 K07404
K00033
///
MF0071 pentose phosphate pathway (non-oxidative branch)
K01807 K01808
K01783
K00615
K00616 K13810
///
MF0072 pyruvate dehydrogenase complex
K00161,K00162,K00163
K00382
K00627
///
MF0073 pyruvate:ferredoxin oxidoreductase
K00169,K00170,K00171,K00172 K03737
///
MF0074 pyruvate:formate lyase
K00656
///
MF0075 acetate to acetyl-CoA
K01895 K01905
///
MF0076 4-aminobutyrate degradation
K00823 K07250 K13524 K14268
K00043,K14534 K08318,K14534 K18120,K14534 K00135 K08324
///
MF0077 formate conversion
K00122 K00123,K00125,K00126
///
MF0078 lactaldehyde degradation
K00048
///
MF0079 lactate consumption I
K00101 K00102
///
MF0080 lactate consumption II
K01026
K00249
///
MF0081 methanol conversion
K04480
K14080,K14081
///
MF0082 putrescine degradation
K09251 K12256 K03343
K00137
///
MF0083 succinate consumption
K18118
K15017 K15038 K18119
K00043 K08318 K18120
K18122
K14534
///
MF0084 succinate conversion to propionate
K11264
///
MF0085 urea degradation
K01941,K01457 K01428,K01429,K01430,K14048 K01427
///
MF0086 acetyl-CoA to acetate
K00625,K00925 K13788,K00925 K15024,K00925 K01905 K01067 K18118
///
MF0087 acetyl-CoA to crotonyl-CoA
K00626
K00023 K01782 K01825 K07516 K07547,K07548 K12405 K15016
K01715 K01692 K01782 K01825 K13767 K15016
///
MF0088 butyrate production I
K00248
K00634
K00929
///
MF0089 butyrate production II
K00248
K01034,K01035 K19709
///
MF0090 ethanol production I
K00656
K00132 K04072 K04073 K18366
K00001 K00121 K04072 K11440 K13953 K13954
///
MF0091 ethanol production II
K01568
K00001 K00121 K04072 K11440 K13953 K13954
///
MF0092 lactate production
K00016 K03777 K03778
///
MF0093 propionate production I
K13923
K00932
///
MF0094 propionate production II
K01026
///
MF0095 propionate production III
K01847 K01849,K01848 K11942
K05606
K03416,K17489,K17490
///
MF0096 succinate production
K01596,K01595
K00024
K01676 K01677,K01678 K01679
K00239,K00240,K00241,K00242
///
MF0097 homoacetogenesis
K05299,K15022
K01938
K01491
K00297
K15023
K00198
K14138,K00197,K00194
///
MF0098 hydrogen metabolism
K00532 K00533,K00534,K06441 K18016,K18017,K18023 K00436,K18005,K18006,K18007
///
MF0099 methanogenesis - methyl-coM
K00399,K00401,K00402
///
MF0100 methanogenesis from carbon dioxide
K00200,K00201,K00202,K00203,K11261
K00204 K00205 K11260
K00672
K01499
K00319 K13942
K00320
K00577,K00578,K00579,K00580,K00581,K00582,K00583,K00584
///
MF0101 nitrate reduction (dissimilatory)
K03385
///
MF0102 sulfate reduction (dissimilatory)
K13811 K00958 K00955 K00957,K00956
K00394,K00395
K11180,K11181
///
MF0103 mucin degradation
K01186
K05970
K01132 K01135 K01137 K01205
K01207 K12373 K14459
K01205 K01207 K12373 K01227 K13714
K01206
///