GitHub - raivivek/biobelt: my daily drivers

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 10 Commits
.deprecated		.deprecated
FIt-SNE		FIt-SNE
old		old
r-imports		r-imports
.gitignore		.gitignore
BAMscale		BAMscale
aggregateGregor		aggregateGregor
bamToWig		bamToWig
bampeTobdg		bampeTobdg
batchUCSC		batchUCSC
batchUCSC.pl		batchUCSC.pl
bdgToBw		bdgToBw
bdgTobw		bdgTobw
bed2gtf		bed2gtf
bed2saf		bed2saf
bedConfusionMatrix		bedConfusionMatrix
bedToBb		bedToBb
bedToSaf		bedToSaf
bedWindowOverlap		bedWindowOverlap
bioawk		bioawk
captureGbrowse		captureGbrowse
checkFastq		checkFastq
chromSizes		chromSizes
chromhmmOverlap		chromhmmOverlap
ciceroFilter		ciceroFilter
ciceroHicOdds		ciceroHicOdds
ciceroToBed		ciceroToBed
ciceroToBedPE		ciceroToBedPE
ciceroToLongrange		ciceroToLongrange
cleanCountOverlap		cleanCountOverlap
clusterfree		clusterfree
code2color		code2color
combine		combine
concatFilesByHeader		concatFilesByHeader
condaLatestPackageVersion.py		condaLatestPackageVersion.py
condaSearchPackages.py		condaSearchPackages.py
condaToContainer		condaToContainer
countOverlap		countOverlap
countReads		countReads
covToBed		covToBed
createHubJson.py		createHubJson.py
createMasterPeaks		createMasterPeaks
create_aggregate_clusters.py		create_aggregate_clusters.py
create_env_yaml.py		create_env_yaml.py
create_master_peaks		create_master_peaks
daemonize		daemonize
drmrarrayFromStdin		drmrarrayFromStdin
duhs		duhs
egacryptor		egacryptor
egacryptor.jar		egacryptor.jar
ensembl2symbol.py		ensembl2symbol.py
errno		errno
explainSamFlag		explainSamFlag
explainSamFlags		explainSamFlags
extractAtaqvDistribution		extractAtaqvDistribution
extractAtaqvMetric2		extractAtaqvMetric2
extractAtaqvProfiles		extractAtaqvProfiles
extract_profiles_ataqv		extract_profiles_ataqv
fast_tsne		fast_tsne
fast_tsne.R		fast_tsne.R
fastq-merge.pl		fastq-merge.pl
fastqLengthDistribution		fastqLengthDistribution
fastqMerge		fastqMerge
fastqMerge.pl		fastqMerge.pl
fetchTss		fetchTss
findBestPartition		findBestPartition
formatHiCtoCicero		formatHiCtoCicero
formatLibraryToWiki		formatLibraryToWiki
formatSumStatsforFgwas.py		formatSumStatsforFgwas.py
formatSumStatsforGarfield.py		formatSumStatsforGarfield.py
formatToWiki		formatToWiki
fxStat		fxStat
gbrowseCapture		gbrowseCapture
gbrowse_capture		gbrowse_capture
gencodeGTFtoGene.py		gencodeGTFtoGene.py
gencodeGTFtoTSS.py		gencodeGTFtoTSS.py
generateGregorConf		generateGregorConf
getReadLengthFastq.py		getReadLengthFastq.py
gffcompare		gffcompare
gregorAggregate		gregorAggregate
gregorCompileOverlappingSnps		gregorCompileOverlappingSnps
gregorMakeConfig		gregorMakeConfig
gregorRun.sh		gregorRun.sh
gwasCatalogApiDownloader		gwasCatalogApiDownloader
gwasCatalogDownloader		gwasCatalogDownloader
idxStats		idxStats
ifdata		ifdata
ifne		ifne
jobinfo		jobinfo
json2yaml		json2yaml
jsonToYaml		jsonToYaml
ldlink.py		ldlink.py
make-tracks.py		make-tracks.py
makeMasterPeaks.R		makeMasterPeaks.R
makeTabix		makeTabix
makeTrackLines		makeTrackLines
make_master_peaks.R		make_master_peaks.R
makefile2dot.py		makefile2dot.py
mappabilityFilter		mappabilityFilter
mappability_filter		mappability_filter