Updated executables

This release contains updated executables for Windows and Linux systems.
To start the executables, simply double-click them (you may need to set permissions for Linux).
It can be helpful to start them from a terminal to have easy access to all logs - in that case, start the Linux executable with ./mako_ubuntu and the Windows executable by simply typing mako_windows.exe.

Improved support for additional metadata

This release changes some of the details of mako's metadata processing functionality, making it more suitable for large-scale meta-analyses by dynamically expanding the database schema with new node labels for string metadata.

Adding Qiime 2 support

This version of mako adds support for Qiime2 FeatureTable and FeatureData archive files, which contain taxon counts and taxonomy.

Updated executables

The code base is mostly identical to v0.2.1, but this time comes with updated executables for Windows 10 and Ubuntu (should work for Ubuntu 16 and upwards).

Demo update

This database dump, containing 60 microbial association networks, has been updated to work with Neo4j 4.2.2.

Updated dependencies

Updated to fix some issues with updated dependencies.

Dump file for Neo4j database

This release contains Neo4j files derived from data sets available via Qiita. The Excel file refers to all original studies and files, and includes some summary statistics of networks inferred with FlashWeave. The dump file can be restored to a Neo4j database.

Initial release

This release contains executable files for Ubuntu (built on 18.04) and Windows, to run the mako GUI on these machines. Run ./mako_ubuntu or mako_windows.exe in the terminal to start up the graphical user interface. Note that these files can take a while to start, since they include all dependencies packaged within the executables.