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[BUG] New joblib breaks hdbscan in GPU jobs #4892

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cjnolet opened this issue Sep 20, 2022 · 2 comments
Open

[BUG] New joblib breaks hdbscan in GPU jobs #4892

cjnolet opened this issue Sep 20, 2022 · 2 comments
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bug Something isn't working inactive-30d

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@cjnolet
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cjnolet commented Sep 20, 2022

Something has updated the joblib dependency from 1.1.0 to 1.2.0, which has broken hdbscan. The exact runtime error is that Memory no longer contains a cachedir argument, which is still being used in the current release of hdbscan (at the time of writing).

I'm attempting to fix this in #4887 but marking this as a placeholder issue to keep track so any patching or specialized tricks done in CI can be reverted.

@cjnolet cjnolet added bug Something isn't working ? - Needs Triage Need team to review and classify and removed ? - Needs Triage Need team to review and classify labels Sep 20, 2022
@github-actions github-actions bot added this to Needs prioritizing in Bug Squashing Sep 20, 2022
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This issue has been labeled inactive-30d due to no recent activity in the past 30 days. Please close this issue if no further response or action is needed. Otherwise, please respond with a comment indicating any updates or changes to the original issue and/or confirm this issue still needs to be addressed. This issue will be labeled inactive-90d if there is no activity in the next 60 days.

@beckernick
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I think this is now fixed upstream, so we should be fine as we pip install scikit-learn-contrib/hdbscan from Github

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