• Tool for the detection and quantification of alternative splicing events from RNA-Seq data.

    Python 37 24 Updated Aug 16, 2018
  • Python 1 MIT Updated Aug 14, 2018
  • Library of common Python code used across various projects

    Jupyter Notebook MIT Updated Aug 10, 2018
  • Code accompanying the publication for compressed graph annotation

    C++ 11 1 GPL-3.0 Updated Jul 19, 2018
  • TensorFlow implementation of the SOM-VAE model as described in https://arxiv.org/abs/1806.02199

    Python 2 MIT Updated Jun 28, 2018
  • Public repository containing research code for the TCGA PanCanAtlas Splicing project

    Python 2 MIT Updated Jun 20, 2018
  • A tool to aggregate custom command line tools into one.

    Python MIT Updated Jun 18, 2018
  • Materials for a reading group on machine learning for healthcare and medicine.

    1 4 MIT Updated Mar 29, 2018
  • Multithreaded wavelet trie construction library

    C++ 1 1 GPL-3.0 Updated Mar 14, 2018
  • Python 1 BSD-3-Clause Updated Mar 5, 2018
  • Recurrent (conditional) generative adversarial networks for generating real-valued time series data.

    Python 146 62 MIT Updated Feb 9, 2018
  • The RNA-seq transcript predictor for multiple samples

    C 1 4 GPL-3.0 Updated Nov 14, 2017
  • Very simple workflows to experiment with containers and cwl

    Python 1 Updated Oct 10, 2017
  • The RNA-seq transcript quantifier with Bias Correction

    Matlab 1 Updated Feb 20, 2017
  • A tool for Read Multi-Mapper Resolution

    C++ 17 GPL-3.0 Updated Feb 15, 2017
  • Code for "Learning Unitary Operators with Help From u(n)", AAAI-17. (https://arxiv.org/abs/1607.04903)

    Python 6 1 Updated Jan 10, 2017
  • Tests for Differential RNA Isoform Expression

    C 4 3 Updated Jan 9, 2017
  • RiboDiff: Tool to detect changes in translational efficiency based on ribosome footprinting data

    Python 7 10 Updated Oct 3, 2016
  • Matlab Updated May 13, 2016
  • C++ implementation of PBWT-seq

    C++ 2 1 Updated Nov 24, 2015
  • The master Oqtans repository with submodules

    Shell 2 Updated Sep 30, 2015
  • Oqtans repository

    C++ 5 4 MIT Updated Sep 30, 2015
  • Source code to compile dependencies for Oqtans

    Shell MIT Updated Sep 30, 2015
  • Documentations of Oqtans

    MIT Updated Sep 30, 2015
  • Binary files of dependencies for Oqtans

    MIT Updated Sep 30, 2015
  • Python MIT Updated Sep 24, 2015
  • The accurate RNA-seq mapper

    C++ 1 Updated Mar 1, 2014
  • The Dyadic Snapshot Scheduler written by Andre Noll and Daniel Richard G. Details can be found here: http://git.tuebingen.mpg.de/cgi-bin/gitweb.cgi?p=dss.git

    C GPL-2.0 Updated Apr 18, 2013
  • The Hidden Markov SVM Toolbox

    Matlab 3 1 Updated Apr 10, 2013
  • Adaboost-Reg and RBF-Network code

    C 1 2 Updated Apr 8, 2013