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Tool for the detection and quantification of alternative splicing events from RNA-Seq data.
Library of common Python code used across various projects
Code accompanying the publication for compressed graph annotation
TensorFlow implementation of the SOM-VAE model as described in https://arxiv.org/abs/1806.02199
Public repository containing research code for the TCGA PanCanAtlas Splicing project
A tool to aggregate custom command line tools into one.
Materials for a reading group on machine learning for healthcare and medicine.
Multithreaded wavelet trie construction library
Recurrent (conditional) generative adversarial networks for generating real-valued time series data.
The RNA-seq transcript predictor for multiple samples
Very simple workflows to experiment with containers and cwl
The RNA-seq transcript quantifier with Bias Correction
A tool for Read Multi-Mapper Resolution
Code for "Learning Unitary Operators with Help From u(n)", AAAI-17. (https://arxiv.org/abs/1607.04903)
Tests for Differential RNA Isoform Expression
RiboDiff: Tool to detect changes in translational efficiency based on ribosome footprinting data
C++ implementation of PBWT-seq
The master Oqtans repository with submodules
Source code to compile dependencies for Oqtans
Documentations of Oqtans
Binary files of dependencies for Oqtans
The accurate RNA-seq mapper
The Dyadic Snapshot Scheduler written by Andre Noll and Daniel Richard G. Details can be found here: http://git.tuebingen.mpg.de/cgi-bin/gitweb.cgi?p=dss.git
The Hidden Markov SVM Toolbox
Adaboost-Reg and RBF-Network code