Bifidobacterium-IEC-transcriptomics Codes used to analyse RNA-Seq data using R library Sleuth in this publication: Bifidobacterium breve UCC2003 induces a distinct global transcriptomic programme in neonatal murine intestinal epithelial cells Raymond Kiu, Agatha Treveil, Lukas C. Harnisch, Shabhonam Caim, Charlotte Leclaire, Douwe van Sinderen, Tamas Korcsmaros, Lindsay J. Hall