Help for occuRN #109
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Help for occuRN #109
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Bringing my form up to date
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Sorry, slight mess there. The "Merge pull request #1..." thing is just updating my fork to match your master. |
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Merged, thanks.
…On Wed, Nov 8, 2017 at 10:44 PM, mikemeredith ***@***.***> wrote:
Sorry, slight mess there. The "Merge pull request #1
<#1>..." thing is just updating
my fork to match your master.
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Richard Chandler
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Warnell School of Forestry and Natural Resources
University of Georgia
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Suggested changes to the help file for occuRN to make it clearer. I know one postgrad who wasted a huge amount of time because he misunderstood it.
Main issue is notation, as the
wmatrix in Royle & Nichols (2003) this is the usual detection history,w[i,j] = 1if the species is detected at siteiin samplej. In the help pagew[i,j]indicates detection of an individual. In fact, since each individual (k) would have a different value, this would have to bew[i,j,k]. To make things worse, the actual detection matrix, for which you generally usey, doesn't appear in the help page.I suggest taking out the reference to
w, as we aren't interested in modelling detections of individuals, and include the model for the detection history.