Skip to content

rboiteau/LC-ICPMS-ESIMS-feature-detection

Repository files navigation

LC-ICPMS-ESIMS Isotope pattern detection for metallomics.

R scripts for aligning LC-ICPMS and LC-ESIMS data and identifying chromatographically correlated isotope features

Requires XCMS package for LC-ESIMS data analysis.

LC-ICPMS data should be imported as a csv file with separate columns for the time and intensity of each isotope X. The headers must be in the format "Time X" and "X" (e.g. "Time 56Fe", "56Fe").

Alignment feature requires a cyanocobalamin peak in both data sets or a user-defined offset.

Tutorial data is available at: https://doi.org/doi:10.25345/C57G5D

About

R scripts for aligning LC-ICPMS and LC-ESIMS data and identifying chromatographically coherent isotope features

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages