SVMCellTransfer: Performed reference mapping of cell annotations
scIsoTyper: Single cell 10X VDJ IMGT clonality mapping for downstream single cell multi-omics analysis
scClonetoire: Single cell 10X VDJ IMGT clonality, V/J gene usages, isotype and SHM statistics for plotting for patient groups/downstream analyses
scRepTransition: Single cell quantification of clonal overlap between B, CD4 or CD8 T cell subsets within a sample or between samples
All are written referencing the Sivakumar et al. 2023 study data.