Python script to identify circular contigs from SPAdes assembler and trim the repeated k-mer found at both terminals.
Usage:
python3 ./spades_circular_contigs.py contigs.fa 73 > circles.fa
Replace 73 with SPAdes k-mer length as needed.
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Python script to identify circular contigs from SPAdes assembler.
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rcedgar/spades_circular_contigs
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Python script to identify circular contigs from SPAdes assembler.
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