Similarly to DSK's 2D histograms, this is the minimizer-space version. Does k-min-mer counting and outputs a 2D histogram h[x][y], corresponding to: the number of times a distinct k-mer is seen x times in the reads and y times in the reference. See example
folder.
-
Notifications
You must be signed in to change notification settings - Fork 0
rchikhi/rust-kminmer2DHisto
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Folders and files
Name | Name | Last commit message | Last commit date | |
---|---|---|---|---|
Repository files navigation
About
Create a KAT-like 2D histogram with k-min-mers counting
Resources
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published