This repo contains code for the Reactome FI Cytoscape app for use with Cytoscape version 3.0.0 and later.
The develop branch contains code which is under development/in testing. Stability is not guaranteed. The master branch contains code which has been tested and is stable. The path-x branch contains code with experimental features for viewing pathways from the Reactome database in Cytoscape.
The main contributors to this project are Dr. Guanming Wu and Dr. Eric T. Dawson. The project was originally supervised by Dr. Lincoln Stein of the Ontario Institute for Cancer Research and currently is managed by Dr. Guanming Wu at OHSU. Compiled binaries (in jar format) are available in the Cytoscape app store and at the Reactome website.