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Colormapping probability volumes #92

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Tracked by #30
JohnTigue opened this issue Nov 20, 2019 · 0 comments
Open
Tracked by #30

Colormapping probability volumes #92

JohnTigue opened this issue Nov 20, 2019 · 0 comments

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@JohnTigue
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JohnTigue commented Nov 20, 2019

[Arguably this is a vis issue, not classify. I.e. change project?]

This is interesting: U-Net deep learning colourisation of greyscale images.

If there were meshes of the cells then could use inside-outside of mesh as training for a classifier. Then have that classifier infer a probability volume, then colorize each voxel by its probability value.

More generally this could be used for any probability volume generating method (rather than say a binary).
It's U-Net acting as a pre-processor for input to a colormap.

@JohnTigue JohnTigue mentioned this issue Nov 20, 2019
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@JohnTigue JohnTigue changed the title U-Net for colormapping Colormapping U-Net Apr 21, 2020
@JohnTigue JohnTigue changed the title Colormapping U-Net Colormapping probability volumes Apr 21, 2020
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