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Import Data File -> Incorrect status during pending #2846

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jkmarx opened this issue Jul 9, 2018 · 0 comments
Closed

Import Data File -> Incorrect status during pending #2846

jkmarx opened this issue Jul 9, 2018 · 0 comments
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@jkmarx
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jkmarx commented Jul 9, 2018

  • Specific code commit: 2f968bf
  • Version of the web browser and OS: Chrome
  • Environment where the error occurred (Vagrant VM and site conf mode or AWS instance): Local dev

Steps to reproduce

Please list all the actions and the input data used:

  1. Upload hg-19-local and add all the data files

Observed behavior

screen shot 2018-07-09 at 11 04 03 am

"nodes": [
        {
            "REFINERY_SUBANALYSIS_68_34_s": "-1",
            "sample_id_Characteristics_68_34_s": "s7_EV_E2_45min",
            "uuid": "db092872-9174-490f-807d-4df1158363c1",
            "REFINERY_NAME_68_34_s": "s7_EV_E2_45min.fastq.gz",
            "organism_Characteristics_68_34_s": "Human",
            "REFINERY_FILETYPE_68_34_s": "FASTQ.GZ file",
            "REFINERY_TYPE_68_34_s": "Raw Data File",
            "REFINERY_WORKFLOW_OUTPUT_68_34_s": "N/A",
            "REFINERY_ANALYSIS_UUID_68_34_s": "N/A",
            "REFINERY_DOWNLOAD_URL_s": "N/A"
        },
        {
            "REFINERY_SUBANALYSIS_68_34_s": "-1",
            "sample_id_Characteristics_68_34_s": "s5_p42_E2_45min.subsample",
            "uuid": "8e44dda5-eb22-4e9a-9733-857e0603be5e",
            "REFINERY_NAME_68_34_s": "s5_p42_E2_45min.subsample.fastq",
            "organism_Characteristics_68_34_s": "Human",
            "REFINERY_FILETYPE_68_34_s": "FASTQ file",
            "REFINERY_TYPE_68_34_s": "Raw Data File",
            "REFINERY_WORKFLOW_OUTPUT_68_34_s": "N/A",
            "REFINERY_ANALYSIS_UUID_68_34_s": "N/A",
            "REFINERY_DOWNLOAD_URL_s": "/media/file_store/cd/e7/s5_p42_E2_45min.subsample_2cQiNhJ.fastq"
        },
        {
            "REFINERY_SUBANALYSIS_68_34_s": "-1",
            "sample_id_Characteristics_68_34_s": "s7_EV_E2_45min.subsample",
            "uuid": "4557476d-3830-48e0-af71-c839ec097861",
            "REFINERY_NAME_68_34_s": "s7_EV_E2_45min.subsample.fastq",
            "organism_Characteristics_68_34_s": "Human",
            "REFINERY_FILETYPE_68_34_s": "FASTQ file",
            "REFINERY_TYPE_68_34_s": "Raw Data File",
            "REFINERY_WORKFLOW_OUTPUT_68_34_s": "N/A",
            "REFINERY_ANALYSIS_UUID_68_34_s": "N/A",
            "REFINERY_DOWNLOAD_URL_s": "/media/file_store/e9/9c/s7_EV_E2_45min.subsample_5128lTS.fastq"
        },
        {
            "REFINERY_SUBANALYSIS_68_34_s": "-1",
            "sample_id_Characteristics_68_34_s": "s5_p42_E2_45min",
            "uuid": "a39ffd89-d9ac-4d60-b4b7-4d9a36b38638",
            "REFINERY_NAME_68_34_s": "s5_p42_E2_45min.fastq.gz",
            "organism_Characteristics_68_34_s": "Human",
            "REFINERY_FILETYPE_68_34_s": "FASTQ.GZ file",
            "REFINERY_TYPE_68_34_s": "Raw Data File",
            "REFINERY_WORKFLOW_OUTPUT_68_34_s": "N/A",
            "REFINERY_ANALYSIS_UUID_68_34_s": "N/A",
            "REFINERY_DOWNLOAD_URL_s": "/media/file_store/41/22/s5_p42_E2_45min.fastq_uDfHXns.gz"
        }
    ]

After a few minutes....
screen shot 2018-07-09 at 11 07 22 am

Expected behavior

Correct status of pending

@jkmarx jkmarx added this to the Release 1.6.5 milestone Jul 9, 2018
@scottx611x scottx611x self-assigned this Jul 9, 2018
@scottx611x scottx611x added this to Backlog in Scott O. Tasks via automation Jul 10, 2018
@scottx611x scottx611x moved this from Backlog to Doing in Scott O. Tasks Jul 10, 2018
Scott O. Tasks automation moved this from Doing to Done Jul 12, 2018
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