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Add support for Galaxy dataset collections #444

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2 tasks done
hackdna opened this issue Sep 8, 2014 · 4 comments
Closed
2 tasks done

Add support for Galaxy dataset collections #444

hackdna opened this issue Sep 8, 2014 · 4 comments

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@hackdna
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hackdna commented Sep 8, 2014

Multiple dataset processing is implemented by workflow expansion from templates in Refinery. Galaxy now supports this internally via dataset collections.
https://wiki.galaxyproject.org/News/2014_06_02_Galaxy_Distribution
http://bit.ly/gcc2014workflows
https://github.com/jmchilton/gcc2014_demo


  • Add WorkflowTool method to create collection descriptions, and the collections themselves regardless of nesting depths (addressed by Scottx611x/dataset collection updates #1980)

    • See : OO approach to this here
  • Retrieve output after DSC -based Workflow runs and reassociate with their respective Refinery Dataset

@jmchilton
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Love this idea, let me know if there is anything I can do on the Galaxy/bioblend side to help :).

@hackdna
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hackdna commented Sep 8, 2014

Thanks John. We'll probably need some help once we start development.

@scottx611x
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#444

@scottx611x scottx611x added this to To Do in Tool APIs May 16, 2017
@scottx611x
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scottx611x commented May 16, 2017

@scottx611x scottx611x moved this from To Do to Related Open Issues in Tool APIs May 16, 2017
@scottx611x scottx611x moved this from Related Open Issues to To Do in Tool APIs May 16, 2017
@scottx611x scottx611x moved this from To Do to Doing in Tool APIs Jul 10, 2017
@scottx611x scottx611x added this to the Release 1.6.0 milestone Jul 28, 2017
@scottx611x scottx611x self-assigned this Jul 28, 2017
@scottx611x scottx611x moved this from Doing to QC in Tool APIs Aug 19, 2017
@scottx611x scottx611x moved this from QC to Done in Tool APIs Sep 5, 2017
@scottx611x scottx611x moved this from Done to QC in Tool APIs Sep 5, 2017
@scottx611x scottx611x moved this from QC to Done in Tool APIs Sep 20, 2017
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