Merge pull request #774 from jgphpc/UES-213_run

[test] Add sde roofline check

cscs-checks/tools/profiling_and_debugging/intel_sde_berkeley_stream.py

@@ -0,0 +1,151 @@
+import os
+
+import reframe as rfm
+import reframe.utility.sanity as sn
+
+
+class SdeBaseTest(rfm.RegressionTest):
+    '''This test checks the values reported by Intel SDE for roofline modeling:
+       - https://software.intel.com/en-us/articles/
+            intel-software-development-emulator
+       - https://bitbucket.org/dwdoerf/stream-ai-example/src/master/
+       - https://www.nersc.gov/
+            users/application-performance/measuring-arithmetic-intensity
+    '''
+    def __init__(self):
+        super().__init__()
+        self.descr = 'Roofline Analysis test with Intel SDE'
+        self.sourcesdir = os.path.join(self.current_system.resourcesdir,
+                                       'roofline', 'sde')
+        self.build_system = 'SingleSource'
+        self.sourcepath = 'stream_mpi.c'
+        self.executable = 'sde'
+        self.target_executable = './stream.exe'
+        self.sde = '%s.sde' % self.target_executable
+        self.rpt = '%s.rpt' % self.target_executable
+        self.build_system.ldflags = ['-g', '-O3', '-qopenmp', '-restrict',
+                                     '-qopt-streaming-stores', 'always']
+        exp = '/apps/dom/UES/jenkins/7.0.UP00/mc/easybuild/experimental'
+        self.pre_run = [
+            'mv %s %s' % (self.executable, self.target_executable),
+            'module use %s/modules/all' % exp,
+            'module load sde',
+            'sde -help'
+        ]
+        self.sanity_patterns = sn.assert_found('Total FLOPs =', self.rpt)
+        self.post_run = ['SDE/parse-sde.sh %s.* &> %s' % (self.sde, self.rpt)]
+        self.maintainers = ['JG']
+        self.tags = {'scs'}
+
+    @property
+    @sn.sanity_function
+    def arithmetic_intensity(self):
+        flops = sn.extractsingle(r'^--->Total FLOPs = (?P<flops>\d+)',
+                                 self.rpt, 'flops', int)
+        bytes = sn.extractsingle(r'^--->Total Bytes = (?P<bytes>\d+)',
+                                 self.rpt, 'bytes', int)
+        return flops/bytes
+
+    @property
+    @sn.sanity_function
+    def gflops(self):
+        flops = sn.extractsingle(r'^--->Total FLOPs = (?P<flops>\d+)',
+                                 self.rpt, 'flops', int)
+        sec = sn.extractsingle(r'^Triad:\s+\d+\.\d+\s+(?P<avgtime>\d+\.\d+)',
+                               self.stdout, 'avgtime', float)
+        step = sn.extractsingle(r'^Each kernel will be executed (?P<step>\d+)',
+                                self.stdout, 'step', int)
+        return flops/(sec*step*10**9)
+
+    def setup(self, partition, environ, **job_opts):
+        self.executable_opts = self.sdeflags
+        super().setup(partition, environ, **job_opts)
+        if self.num_tasks != 36:
+            self.job.options = ['--cpu-bind=verbose,none']
+        else:
+            self.job.options = ['--cpu-bind=verbose']
+
+
+@rfm.parameterized_test(*[[num_ranks, arraysize]
+                        for num_ranks in [2]
+                        for arraysize in [100000000]])
+# For parameter space study, you may want to use:
+# for num_ranks in [36, 18, 12, 9, 6, 4, 3, 2, 1]
+# for arraysize in [400000000, 200000000, 100000000]])
+class SdeBroadwellJ1Test(SdeBaseTest):
+    def __init__(self, num_ranks, arraysize):
+        super().__init__()
+        ompthread = 36 // num_ranks
+        self.valid_systems = ['dom:mc']
+        self.valid_prog_environs = ['PrgEnv-intel']
+        self.build_system.cppflags = [
+            '-D_SDE',
+            '-DSTREAM_ARRAY_SIZE=%s' % arraysize,
+            '-DNTIMES=50'
+        ]
+        self.exclusive = True
+        self.num_tasks = num_ranks
+        self.num_tasks_per_node = num_ranks
+        self.num_cpus_per_task = ompthread
+        self.num_tasks_per_core = 1
+        self.use_multithreading = False
+        self.name = 'sde_n.{:010d}_MPI.{:03d}_OpenMP.{:03d}_j.{:01d}'.format(
+            arraysize, num_ranks, ompthread, self.num_tasks_per_core)
+        self.variables = {
+            'CRAYPE_LINK_TYPE': 'dynamic',
+            'OMP_NUM_THREADS': str(self.num_cpus_per_task)
+        }
+        self.sdeflags = ['%s -d -iform 1 -omix %s -i -top_blocks 500 '
+                         '-global_region -start_ssc_mark 111:repeat '
+                         '-stop_ssc_mark 222:repeat -- %s' %
+                         ('-bdw', self.sde, self.target_executable)]
+        # References for Intel Broadwell CPU (E5-2695 v4):
+        ai = 0.0825
+        gflops = 9.773
+        self.sanity_patterns = sn.all([
+            sn.assert_reference(self.gflops, gflops, -0.1, 0.3),
+            sn.assert_reference(self.arithmetic_intensity, ai, -0.1, 0.3),
+        ])
+
+
+@rfm.parameterized_test(*[[num_ranks, arraysize]
+                        for num_ranks in [2]
+                        for arraysize in [100000000]])
+# For parameter space study, you may want to use:
+# for num_ranks in [72, 36, 24, 18, 12, 9, 8, 6, 4, 3, 2,
+#                 1]
+# for arraysize in [400000000, 200000000, 100000000]])
+class SdeBroadwellJ2Test(SdeBaseTest):
+    def __init__(self, num_ranks, arraysize):
+        super().__init__()
+        ompthread = 72 // num_ranks
+        self.valid_systems = ['dom:mc']
+        self.valid_prog_environs = ['PrgEnv-intel']
+        self.build_system.cppflags = [
+            '-D_SDE',
+            '-DSTREAM_ARRAY_SIZE=%s' % arraysize,
+            '-DNTIMES=50'
+        ]
+        self.exclusive = True
+        self.num_tasks = num_ranks
+        self.num_tasks_per_node = num_ranks
+        self.num_cpus_per_task = ompthread
+        self.num_tasks_per_core = 2
+        self.use_multithreading = True
+        self.name = 'sde_n.{:010d}_MPI.{:03d}_OpenMP.{:03d}_j.{:01d}'.format(
+            arraysize, num_ranks, ompthread, self.num_tasks_per_core)
+        self.variables = {
+            'CRAYPE_LINK_TYPE': 'dynamic',
+            'OMP_NUM_THREADS': str(self.num_cpus_per_task)
+        }
+        self.sdeflags = ['%s -d -iform 1 -omix %s -i -top_blocks 500 '
+                         '-global_region -start_ssc_mark 111:repeat '
+                         '-stop_ssc_mark 222:repeat -- %s' %
+                         ('-bdw', self.sde, self.target_executable)]
+        # References for Intel Broadwell CPU (E5-2695 v4):
+        ai = 0.0822
+        gflops = 9.602
+        self.sanity_patterns = sn.all([
+            sn.assert_reference(self.gflops, gflops, -0.1, 0.3),
+            sn.assert_reference(self.arithmetic_intensity, ai, -0.1, 0.3),
+        ])

cscs-checks/tools/profiling_and_debugging/intel_sde_roofline.py

@@ -0,0 +1,129 @@
+import os
+
+import reframe as rfm
+import reframe.utility.sanity as sn
+
+
+@rfm.parameterized_test(*[[repeat, toolsversion, datalayout]
+                          for repeat in ['100000']
+                          for toolsversion in ['8.35.0']
+                          for datalayout in ['G3_AOS_SCALAR', 'G3_SOA_SCALAR',
+                                             'G3_AOS_VECTOR', 'G3_SOA_VECTOR']
+                          ])
+class IntelRooflineSdeTest(rfm.RegressionTest):
+    '''This test checks the values reported by Intel SDE for roofline modeling:
+       - https://software.intel.com/en-us/articles/
+            intel-software-development-emulator
+       - https://bitbucket.org/dwdoerf/stream-ai-example/src/master/
+       - https://www.nersc.gov/
+            users/application-performance/measuring-arithmetic-intensity
+    '''
+    def __init__(self, repeat, toolsversion, datalayout):
+        super().__init__()
+        self.descr = 'Roofline Analysis test with Intel SDE'
+        self.valid_systems = ['dom:mc']
+        # Reporting MFLOPS is not available on Intel Haswell cpus, see
+        # https://www.intel.fr/content/dam/www/public/us/en/documents/manuals/
+        # 64-ia-32-architectures-software-developer-vol-1-manual.pdf
+        self.valid_prog_environs = ['PrgEnv-intel']
+        self.sourcesdir = os.path.join(self.current_system.resourcesdir,
+                                       'roofline', 'intel_advisor')
+        self.build_system = 'SingleSource'
+        self.sourcepath = '_roofline.cpp'
+        self.executable = 'sde'
+        self.target_executable = './roof.exe'
+        self.sde = '%s.sde' % self.target_executable
+        self.rpt = '%s.rpt' % self.target_executable
+        self.prebuild_cmd = [
+            'patch < SDE/roofline_template.patch',
+            'sed -e "s-XXXX-%s-" -e "s-YYYY-%s-" %s &> %s' %
+            (repeat, datalayout, 'roofline_template.cpp', '_roofline.cpp')
+        ]
+        self.build_system.cppflags = ['-D_SDE']
+        self.build_system.ldflags = ['-g', '-O3', '-qopenmp', '-restrict',
+                                     '-qopt-streaming-stores', 'always',
+                                     '-std=c++11']
+        self.exclusive = True
+        self.num_tasks = 1
+        self.num_tasks_per_node = 1
+        self.num_cpus_per_task = 1
+        self.num_tasks_per_core = 1
+        self.use_multithreading = False
+        self.variables = {
+            'CRAYPE_LINK_TYPE': 'dynamic',
+            'OMP_NUM_THREADS': str(self.num_cpus_per_task),
+        }
+        exp = '/apps/dom/UES/jenkins/7.0.UP00/mc/easybuild/experimental'
+        self.pre_run = [
+            'mv %s %s' % (self.executable, self.target_executable),
+            'module use %s/modules/all' % exp,
+            'module load sde',
+            'sde -help'
+        ]
+        self.sdeflags = ['%s -d -iform 1 -omix %s -i -top_blocks 500 '
+                         '-global_region -start_ssc_mark 111:repeat '
+                         '-stop_ssc_mark 222:repeat -- %s' %
+                         ('-bdw', self.sde, self.target_executable)]
+        self.executable_opts = self.sdeflags
+        self.sanity_patterns = sn.assert_found('Total FLOPs =', self.rpt)
+        self.post_run = ['SDE/parse-sde.sh %s.* &> %s' % (self.sde, self.rpt)]
+        self.maintainers = ['JG']
+        self.tags = {'scs'}
+        self.sanity_patterns = sn.all([
+            sn.assert_eq(sn.extractsingle(
+                r'^Intel\(R\) Software Development Emulator\.  Version:  '
+                r'(?P<toolsversion>\d+\.\d+\.\d+)', self.stdout,
+                'toolsversion'), toolsversion),
+        ])
+        # References for Intel Broadwell CPU (E5-2695 v4):
+        references = {
+            'G3_AOS_SCALAR': {
+                'dom:mc': {
+                    'gflops': (0.596, -0.1, 0.3, 'Gflop/s'),
+                    'ai': (0.16, -0.05, 0.05, 'flop/byte')
+                }
+            },
+            'G3_SOA_SCALAR': {
+                'dom:mc': {
+                    'gflops': (0.612, -0.1, 0.3, 'Gflop/s'),
+                    'ai': (0.16, -0.05, 0.05, 'flop/byte')
+                }
+            },
+            'G3_AOS_VECTOR': {
+                'dom:mc': {
+                    'gflops': (1.152, -0.1, 0.3, 'Gflop/s'),
+                    'ai': (0.125, -0.05, 0.05, 'flop/byte')
+                }
+            },
+            'G3_SOA_VECTOR': {
+                'dom:mc': {
+                    'gflops': (1.125, -0.1, 0.3, 'Gflop/s'),
+                    'ai': (0.16, -0.05, 0.05, 'flop/byte')
+                }
+            },
+        }
+        self.reference = references[datalayout]
+        self.perf_patterns = {
+            'gflops': self.gflops,
+            'ai': self.arithmetic_intensity,
+        }
+
+    @property
+    @sn.sanity_function
+    def arithmetic_intensity(self):
+        flops = sn.extractsingle(r'^--->Total FLOPs = (?P<flops>\d+)',
+                                 self.rpt, 'flops', int)
+        bytes = sn.extractsingle(r'^--->Total Bytes = (?P<bytes>\d+)',
+                                 self.rpt, 'bytes', int)
+        # debug: print('ai={}'.format(flops/bytes))
+        return flops/bytes
+
+    @property
+    @sn.sanity_function
+    def gflops(self):
+        flops = sn.extractsingle(r'^--->Total FLOPs = (?P<flops>\d+)',
+                                 self.rpt, 'flops', int)
+        msec = sn.extractsingle(r'^elapsed time: (?P<msec>\d+)ms', self.stdout,
+                                'msec', float)
+        # debug: print('gflops={}'.format(flops/((msec/1000)*10**6)))
+        return (flops/((msec/1000))/10**9)