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I tried to run this tool on Mac OS (Monterey) and have problems running provided test examples.
I had some problems with conda on my computer, so I compiled it myself.
Running make resulted in clang: error: unsupported option '-static-libgcc'. After I deleted this flag from Makefile it compiled. When I tried to test it using your instructions, I got this error:
> ./colord compress-ont ./../test/M.bovis.fastq ont.default
colord(28784,0x1064c6600) malloc: *** error for object 0xb43ac010120: pointer being freed was not allocated
colord(28784,0x1064c6600) malloc: *** set a breakpoint in malloc_error_break to debug
zsh: abort ./colord compress-ont ./../test/M.bovis.fastq ont.default
I have the same problem for all other test examples.
Is there anything you can suggest? Thanks in advance
The text was updated successfully, but these errors were encountered:
thanks for reporting this!
I think I have fixed that. Could you please try again?
Use git clone --recurse-submodules https://github.com/refresh-bio/colord to get a fresh clone.
I would really appreciate the feedback.
Hi!
I tried to run this tool on Mac OS (Monterey) and have problems running provided test examples.
I had some problems with
conda
on my computer, so I compiled it myself.Running
make
resulted inclang: error: unsupported option '-static-libgcc'
. After I deleted this flag from Makefile it compiled. When I tried to test it using your instructions, I got this error:I have the same problem for all other test examples.
Is there anything you can suggest? Thanks in advance
The text was updated successfully, but these errors were encountered: