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ReMap

List of repositories for the ReMap projects. ReMap is an integrative analysis of transcriptional regulators for DNA-binding experiments from public datasets

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  1. remap-pipeline remap-pipeline Public

    As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMap team and external teams. This is es…

    Python 7 5

  2. ReMapEnrich ReMapEnrich Public

    ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, auto…

    HTML 12 5

  3. peakMerge peakMerge Public

    Python 1

Repositories

Showing 5 of 5 repositories
  • remap-pipeline Public

    As the ReMap project expands dramatically and regulatory catalogs for other species are requested, it becomes essential to enable joint efforts between the ReMap team and external teams. This is essential for future collaborative production efforts. Briefly, our pipelines uses SnakeMake either in a Conda or Singularity environment depending on t…

    remap-cisreg/remap-pipeline’s past year of commit activity
    Python 7 5 1 0 Updated Apr 20, 2022
  • ReMapEnrich Public

    ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, automate and plot the enrichment analysis for genomic regions.

    remap-cisreg/ReMapEnrich’s past year of commit activity
    HTML 12 5 10 (2 issues need help) 1 Updated Feb 2, 2022
  • peakMerge Public
    remap-cisreg/peakMerge’s past year of commit activity
    Python 1 0 0 0 Updated Sep 3, 2021
  • remap-rest Public

    Language agnostic RESTful data access to ReMap data over HTTP

    remap-cisreg/remap-rest’s past year of commit activity
    Shell 1 1 0 0 Updated Mar 30, 2021
  • remap-docker-images Public

    Repository for docker images that are hosted on docker hub

    remap-cisreg/remap-docker-images’s past year of commit activity
    1 0 0 0 Updated May 15, 2019

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