Simple Bayesian Inference of SIR Parameters in RSA. Methodology used here is from:
Bayesian Inference of COVID-19 Spreading Rates in South Africa Rendani Mbuvha, Tshilidzi Marwala medRxiv 2020.04.28.20083873; doi: https://doi.org/10.1101/2020.04.28.20083873
To run the notebook:
pip3 install pymc3
pip3 install theano
pip3 install git+https://github.com/rendanim/covid19_inference_forecast.git