Citation and table, figure references are not getting recognized. Header misaligned.

[Divyasha02]

PR: #103

lenovo@lenovo-Lenovo-ideapad-330-15IKB:~/MLRC/2021$ ./build_all.sh
Building ahmed2022re/
/home/lenovo/MLRC/2021/ahmed2022re/journal
Latexmk: This is Latexmk, John Collins, 26 Dec. 2019, version: 4.67.
Latexmk: This is Latexmk, John Collins, 26 Dec. 2019, version: 4.67.
Rule 'pdflatex': The following rules & subrules became out-of-date:
      'pdflatex'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'xelatex -interaction=nonstopmode  -recorder  "article.tex"'
------------
Latexmk: References changed.
Latexmk: Non-existent bbl file 'article.bbl'
 No file article.bbl.
Latexmk: Missing input file: 'Capture.png' from line
  'LaTeX Warning: File `Capture.png' not found on input line 99.'
Latexmk: Missing input file: 'Capture.png' from line
  '! Unable to load picture or PDF file 'Capture.png'.'
Latexmk: Missing input file: 'graph_1.png' from line
  'LaTeX Warning: File `graph_1.png' not found on input line 311.'
Latexmk: Missing input file: 'graph_1.png' from line
  '! Unable to load picture or PDF file 'graph_1.png'.'
Latexmk: References changed.
Latexmk: References changed.
Latexmk: Log file says output to 'article.pdf'
Latexmk: List of undefined refs and citations:
  Citation 'hartley2020dtoolai' on page 3 undefined on input line 34
  Citation 'he2016deep' on page 3 undefined on input line 44
  Citation 'he2016deep' on page 5 undefined on input line 67
  Citation 'he2016deep' on page 5 undefined on input line 69
  Citation 'heumos2021mlf' on page 3 undefined on input line 34
  Citation 'kornblith2019similarity' on page 7 undefined on input line 129
  Citation 'krizhevsky2009learning' on page 3 undefined on input line 44
  Citation 'loshchilov2016sgdr' on page 6 undefined on input line 122
  Citation 'paszke2019pytorch' on page 5 undefined on input line 67
  Citation 'renard2020variability' on page 3 undefined on input line 34
  Citation 'summers2021nondeterminism' on page 1 undefined on input line 3
  Citation 'summers2021nondeterminism' on page 1 undefined on input line 8
  Citation 'summers2021nondeterminism' on page 11 undefined on input line 342
  Citation 'summers2021nondeterminism' on page 9 undefined on input line 170
  Citation 'summers2021nondeterminism' on page 9 undefined on input line 177
  Citation 'szegedy2015going' on page 1 undefined on input line 3
  Citation 'wen2020batchensemble' on page 1 undefined on input line 3
  Citation 'zhuang2021randomness' on page 3 undefined on input line 34
  Citation 'zhuang2021randomness' on page 3 undefined on input line 47
  Reference `fig:pic0' on page 5 undefined on input line 69
  Reference `fig:pic1' on page 11 undefined on input line 276
  Reference `sec:AdditionalResults' on page 5 undefined on input line 58
  Reference `sec:Results' on page 12 undefined on input line 363
  Reference `table:table1' on page 5 undefined on input line 69
  Reference `table:table10' on page 11 undefined on input line 342
  Reference `table:table2' on page 5 undefined on input line 106
  Reference `table:table3' on page 7 undefined on input line 143
  Reference `table:table4' on page 9 undefined on input line 177
  Reference `table:table5' on page 9 undefined on input line 200
  Reference `table:table6' on page 10 undefined on input line 217
  Reference `table:table7' on page 10 undefined on input line 217
  Reference `table:table7' on page 10 undefined on input line 219
  Reference `table:table8' on page 11 undefined on input line 276
  Reference `table:table9' on page 11 undefined on input line 316
------------
Running 'make "Capture.png"'
------------
make[1]: *** No rule to make target 'Capture.png'.  Stop.
------------
Running 'make "article.bbl"'
------------
make[1]: *** No rule to make target 'article.bbl'.  Stop.
------------
Running 'make "graph_1.png"'
------------
make[1]: *** No rule to make target 'graph_1.png'.  Stop.
Latexmk: Summary of warnings from last run of (pdf)latex:
  Latex failed to resolve 21 reference(s)
  Latex failed to resolve 23 citation(s)
Collected error summary (may duplicate other messages):
  pdflatex: Command for 'pdflatex' gave return code 1
      Refer to 'article.log' for details
Latexmk: Use the -f option to force complete processing,
 unless error was exceeding maximum runs, or warnings treated as errors.
make: *** [Makefile:30: article.pdf] Error 12
Build complete
rm: cannot remove 'article.bbl': No such file or directory
rm: cannot remove 'article.blg': No such file or directory
Building editorial/
/home/lenovo/MLRC/2021/editorial/journal
Latexmk: This is Latexmk, John Collins, 26 Dec. 2019, version: 4.67.
Latexmk: This is Latexmk, John Collins, 26 Dec. 2019, version: 4.67.
Rule 'pdflatex': The following rules & subrules became out-of-date:
      'pdflatex'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'xelatex -interaction=nonstopmode  -recorder  "article.tex"'
------------
Latexmk: References changed.
Latexmk: Non-existent bbl file 'article.bbl'
 No file article.bbl.
Latexmk: References changed.
Latexmk: References changed.
Latexmk: Log file says output to 'article.pdf'
Latexmk: List of undefined refs and citations:
  Citation 'Roboto:2011' on page 2 undefined on input line 74
  Citation 'Rougier:2017' on page 1 undefined on input line 12
  Citation 'Rougier:2017' on page 1 undefined on input line 26
  Citation 'Rougier:2018' on page 1 undefined on input line 13
  Citation 'Science:2018' on page 1 undefined on input line 11
  Citation 'SourceCodePro:2012' on page 2 undefined on input line 74
  Citation 'SourceSerifPro:2014' on page 2 undefined on input line 74
  Citation 'Topalidou:2015' on page 1 undefined on input line 4
------------
Running 'make "article.bbl"'
------------
make[1]: *** No rule to make target 'article.bbl'.  Stop.
Rule 'biber article': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'article.bcf'
------------
Run number 1 of rule 'biber article'
------------
------------
Running 'biber  "article"'
------------
Latexmk: Found biber source file(s) [article.bcf bibliography.bib]
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'article.aux'
      'article.bbl'
      'article.out'
------------
Run number 2 of rule 'pdflatex'
------------
------------
Running 'xelatex -interaction=nonstopmode  -recorder  "article.tex"'
------------
Latexmk: Found input bbl file 'article.bbl'
Latexmk: Log file says output to 'article.pdf'
Latexmk: Found biber source file(s) [article.bcf bibliography.bib]
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'article.aux'
      'article.run.xml'
------------
Run number 3 of rule 'pdflatex'
------------
------------
Running 'xelatex -interaction=nonstopmode  -recorder  "article.tex"'
------------
Latexmk: Found input bbl file 'article.bbl'
Latexmk: Log file says output to 'article.pdf'
Latexmk: Found biber source file(s) [article.bcf bibliography.bib]
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'article.aux'
      'article.run.xml'
------------
Run number 4 of rule 'pdflatex'
------------
------------
Running 'xelatex -interaction=nonstopmode  -recorder  "article.tex"'
------------
Latexmk: Found input bbl file 'article.bbl'
Latexmk: Log file says output to 'article.pdf'
Latexmk: Found biber source file(s) [article.bcf bibliography.bib]
Build complete

[Divyasha02]

@koustuvsinha could you please let me know what can i do to make it work. its seems like many of us facing the same issue. i havent included xcolor package nor any bibiliographical package. still this issue is not resolved.

[koustuvsinha]

Added my comments in the PR. Tip: It helps to study the build.log carefully to isolate the issues!