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hey, I am sorry to bother you. When I use SCnorm to normalisation the dataset. it alerts that "Must supply gene/row names!". But I do it follow the SCnorm_vignette.pdf. What should I do about it? Do I need to provide the row names for SCnorm. And how can I provide row names to SCnorm?
Thanks.
Best regards.
The text was updated successfully, but these errors were encountered:
Hi Feiran,
Thanks for using SCnorm! If you have a data matrix named Data, then you can
add rownames via:
rownames(Data) <- (your vector containing row names)
If you are just trying to run an example then you could temporarily do
something like:
rownames(Data) <- as.character(seq(1,nrow(Data)))
If this does not resolve your question, please reply with the lines of code
that are not working and I am happy to help.
Best,
Rhonda
On Mon, Apr 19, 2021 at 10:27 PM Feiran Xiang ***@***.***> wrote:
hey, I am sorry to bother you. When I use SCnorm to normalisation the
dataset. it alerts that "Must supply gene/row names!". But I do it follow
the SCnorm_vignette.pdf. What should I do about it? Do I need to provide
the row names for SCnorm. And how can I provide row names to SCnorm?
Thanks.
Best regards.
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Rhonda Bacher, PhD
Assistant Professor
Department of Biostatistics
University of Florida
Office: 5239 CTRB
Phone: 352-294-5914
Email: ***@***.***
http://rhondabacher.com/
hey, I am sorry to bother you. When I use SCnorm to normalisation the dataset. it alerts that "Must supply gene/row names!". But I do it follow the SCnorm_vignette.pdf. What should I do about it? Do I need to provide the row names for SCnorm. And how can I provide row names to SCnorm?
Thanks.
Best regards.
The text was updated successfully, but these errors were encountered: