This generate-yaml repository houses the RShiny GUI to aid in the generation of the YAML configuration file to run the riboviz ribosome profiling pipeline.
There are 2 ways to deploy the GUI:
- within R, run
shiny::runGitHub("generate-yaml", "riboviz", ref="main")
- in a browser, go to riboviz.shinyapps.io/generate-yaml
For more details about Riboviz workflow configuration parameters, click here.