This repository contains codes from the following project:
- Genomic atlas of the plasma metabolome prioritizes metabolites implicated in human diseases (Yiheng Chen, Tianyuan Lu, Ulrika Pettersson-Kymmer, Isobel D. Stewart, Guillaume Butler-Laporte, Tomoko Nakanishi, Agustin Cerani, Kevin Y.H. Liang, Satoshi Yoshiji, Julian Daniel Sunday Willett, Chen-Yang Su, Parminder Raina, Celia M.T. Greenwood, Yossi Farjoun, Vincenzo Forgetta, Claudia Langenberg, Sirui Zhou, Claes Ohlsson, J Brent Richards*)
GCTA-fastGWA (v1.93.2 beta), GCTA-COJO (v1.93.2 beta), bedtools (v2.29.2), KING package (v2.2.5), PLINK(1.9). R (version 4.0.5): R packages including dplyr (1.0.7), data.table (1.14.2), tidyverse (1.2.0), stringr (1.4.1), circlize (0.4.13), ComplexHeatmap (2.13.1), RcolorBrewer (1.1-3), ggpubr (0.4.0) and ggplot2 (3.3.5).