R-CMD-check #115
richelbilderbeek
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13 warnings
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R-CMD-check
Node.js 12 actions are deprecated. Please update the following actions to use Node.js 16: actions/checkout@v2. For more information see: https://github.blog/changelog/2022-09-22-github-actions-all-actions-will-begin-running-on-node16-instead-of-node12/.
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R-CMD-check:
R/check_target_name.R#L17
file=R/check_target_name.R,line=17,col=25,[object_usage_linter] no visible global function definition for ‘get_target_names’
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R-CMD-check:
R/check_target_name.R#L21
file=R/check_target_name.R,line=21,col=35,[object_usage_linter] no visible global function definition for ‘get_target_names’
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R-CMD-check:
R/create_consensus_topology_conservation.R#L26
file=R/create_consensus_topology_conservation.R,line=26,col=3,[object_usage_linter] local variable ‘protein_alignment’ assigned but may not be used
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R-CMD-check:
R/create_consensus_topology_conservation.R#L46
file=R/create_consensus_topology_conservation.R,line=46,col=7,[commented_code_linter] Commented code should be removed.
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R-CMD-check:
R/create_consensus_topology_conservation.R#L49
file=R/create_consensus_topology_conservation.R,line=49,col=7,[commented_code_linter] Commented code should be removed.
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R-CMD-check:
R/create_consensus_topology_conservation.R#L50
file=R/create_consensus_topology_conservation.R,line=50,col=7,[commented_code_linter] Commented code should be removed.
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R-CMD-check:
R/create_consensus_topology_conservation.R#L51
file=R/create_consensus_topology_conservation.R,line=51,col=7,[commented_code_linter] Commented code should be removed.
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R-CMD-check:
R/create_consensus_topology_conservation.R#L54
file=R/create_consensus_topology_conservation.R,line=54,col=5,[commented_code_linter] Commented code should be removed.
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R-CMD-check:
R/create_consensus_topology_conservation.R#L56
file=R/create_consensus_topology_conservation.R,line=56,col=5,[commented_code_linter] Commented code should be removed.
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R-CMD-check:
R/create_consensus_topology_conservation.R#L58
file=R/create_consensus_topology_conservation.R,line=58,col=7,[commented_code_linter] Commented code should be removed.
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R-CMD-check
Undocumented arguments in documentation object 'simplify_haplotype_names'
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R-CMD-check
Undocumented arguments in documentation object 'simplify_haplotype_names'
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