Merge pull request #108 from rigdenlab/pyravpi

Fixed problem in file paths
rigdenlab · Jul 15, 2019 · f211189 · f211189
2 parents 7f0014d + 7738f3a
commit f211189
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/simbad/util/pyrvapi_results.py b/simbad/util/pyrvapi_results.py
@@ -506,7 +506,7 @@ def create_contaminant_results_tab(self, contaminant_results, contaminant_mr_res
             for i in range(0, results_to_display):
                 try:
                     pdb_code = df.loc[i][0]
-                    mr_workdir = os.path.join(self.work_dir, 'output_files')
+                    mr_workdir = os.path.join(self.work_dir, 'output_files', pdb_code)
                     mr_log = os.path.join(mr_workdir, '{0}_mr.log'.format(pdb_code))
                     ref_pdb = os.path.join(mr_workdir, '{0}_refinement_output.pdb'.format(pdb_code))
                     ref_mtz = os.path.join(mr_workdir, '{0}_refinement_output.mtz'.format(pdb_code))
@@ -598,7 +598,7 @@ def create_morda_db_results_tab(self, morda_db_results, morda_db_mr_results, res
             for i in range(0, results_to_display):
                 try:
                     pdb_code = df.loc[i][0]
-                    mr_workdir = os.path.join(self.work_dir, 'output_files')
+                    mr_workdir = os.path.join(self.work_dir, 'output_files', pdb_code)
                     mr_log = os.path.join(mr_workdir, '{0}_mr.log'.format(pdb_code))
                     ref_pdb = os.path.join(mr_workdir, '{0}_refinement_output.pdb'.format(pdb_code))
                     ref_mtz = os.path.join(mr_workdir, '{0}_refinement_output.mtz'.format(pdb_code))