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Felix Simkovic committed Jan 30, 2017
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Expand Up @@ -34,48 +34,35 @@ This project is a result of the continuous struggle using residue-residue contac


Key Features
~~~~~~~~~~~~
++++++++++++

- Parsers for Multiple Sequence Alignment and contact prediction files
- Easy-to-use wrappers for the most-commonly used software, e.g. HHblits, Jackhmmer, CCMpred, PSICOV, ...
- Many convenience functions for prediction-structure matching, determination of True Positive contacts, calculation of MSA and contact prediction statistics, etc.

Installation & Usage
~~~~~~~~~~~~~~~~~~~~

Please refer to `ConKit's documentation`_.

.. note::

News
~~~~

ConKit was presented at the CCP4 Study Weekend 2017. A recording of the presentation is available on `YouTube <https://youtu.be/YhHkfa7ggAE>`_ and the slides are available `here <https://fsimkovic.github.io/Presentations/ccp4_sw2017.html#/>`_.
ConKit was recently presented at the CCP4 Study Weekend 2017. A recording of the presentation is available on `YouTube <https://youtu.be/YhHkfa7ggAE>`_.

Installation & Usage
++++++++++++++++++++
Please refer to `ConKit's documentation <http://www.conkit.org>`_.

Contributing
~~~~~~~~~~~~

++++++++++++
There are two ways by which you can contribute to ConKit:

1. Submit any suggestions to the `GitHub Issue Tracker`_, or
2. Fork this repository, commit your changes and submit a pull request.


Found a Bug?
~~~~~~~~~~~~
++++++++++++
Please use the `GitHub Issue Tracker`_.


Ackowledgements
~~~~~~~~~~~~~~~
- `Stefan Seemayer`_
- `BioPython`_

+++++++++++++++
- `Stefan Seemayer <https://github.com/sseemayer>`_
- `BioPython <https://www.biopython.org>`_


.. _BioPython: https://www.biopython.org
.. _CCP4: http://www.ccp4.ac.uk
.. _CCP-EM: http://www.ccpem.ac.uk
.. _ConKit's documentation: http://www.conkit.org
.. _GitHub Issue Tracker: https://github.com/fsimkovic/conkit/issues
.. _Stefan Seemayer: https://github.com/sseemayer

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