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Functions implementing the SAEM algorithm combined with Kalman filtering techniques, and an estimation procedure for the SIR model example when considering prevalence and incidence data.

rnarci/SAEM-Kalman

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Two folders:

- prevalence -> R scripts for prevalence data

- incidence  -> R scripts for incidence data

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Functions implementing the SAEM algorithm combined with Kalman filtering techniques, and an estimation procedure for the SIR model example when considering prevalence and incidence data.

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