GitHub - rnrlab/pipolin_genomes: Analysis of pipolin-harboring bacteria genomes

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
.Rproj.user		.Rproj.user
.quarto		.quarto
docs		docs
finder_results		finder_results
.Rhistory		.Rhistory
AMRfinder.py		AMRfinder.py
AMRfinder_output.csv		AMRfinder_output.csv
Practicas_Guille.Rproj		Practicas_Guille.Rproj
_quarto.yml		_quarto.yml
amrfinder.qmd		amrfinder.qmd
genome_filter.py		genome_filter.py
index.qmd		index.qmd
integron.qmd		integron.qmd
integron_filtering.sh		integron_filtering.sh
integron_summary.csv		integron_summary.csv
orit.qmd		orit.qmd
pipolin_summary_new.tsv		pipolin_summary_new.tsv
styles.css		styles.css
test_oriT.tsv		test_oriT.tsv
virulencefinder.qmd		virulencefinder.qmd
virulencefinder_output.zip		virulencefinder_output.zip
virulencefinder_to_csv.py		virulencefinder_to_csv.py