GitHub - romain-ragonnet/tb_natural_history: Code used for the analysis of TB natural history. R is used to format the data and to estimate the model parameters using a Bayesian approach.

Name		Name	Last commit message	Last commit date
Latest commit History 95 Commits
data		data
hierarchical model		hierarchical model
outputs		outputs
review_of_models		review_of_models
.Rhistory		.Rhistory
.gitattributes		.gitattributes
.gitignore		.gitignore
case_fatality.png		case_fatality.png
fixed_effect_model.rds		fixed_effect_model.rds
fixed_effect_model.stan		fixed_effect_model.stan
fixed_effect_model_fitted_mu.rds		fixed_effect_model_fitted_mu.rds
fixed_effect_model_fitted_mu.stan		fixed_effect_model_fitted_mu.stan
graph_tools.R		graph_tools.R
load_data.R		load_data.R
ode_model.R		ode_model.R
plot_mu_priors.R		plot_mu_priors.R
random_effect_model.rds		random_effect_model.rds
random_effect_model.stan		random_effect_model.stan
random_effect_model_fitted_mu.rds		random_effect_model_fitted_mu.rds
random_effect_model_fitted_mu.stan		random_effect_model_fitted_mu.stan
random_effect_model_fitted_mu_gamma_priors.stan		random_effect_model_fitted_mu_gamma_priors.stan
random_effect_model_fitted_mu_gamma_priors_substracted_tb_mortality.stan		random_effect_model_fitted_mu_gamma_priors_substracted_tb_mortality.stan
random_effect_model_fitted_mu_substracted_tb_mortality.stan		random_effect_model_fitted_mu_substracted_tb_mortality.stan
review_classes.R		review_classes.R
run_analysis.R		run_analysis.R
summer_model.R		summer_model.R
tb_duration_calculations.R		tb_duration_calculations.R
tb_mortality_exponential_fit.stan		tb_mortality_exponential_fit.stan