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Could not find object associated with idref RelaxedClock.c:anthus_aco #22

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richelbilderbeek opened this issue Mar 8, 2018 · 3 comments
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Could not find object associated with idref RelaxedClock.c:anthus_aco #22

richelbilderbeek opened this issue Mar 8, 2018 · 3 comments
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v1.13

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@richelbilderbeek
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GTR relaxed_log_normal birth_death

bad.txt
@richelbilderbeek
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Shorter XML file:

bad.txt

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richelbilderbeek commented Mar 8, 2018 •
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GTR relaxed_log_normal birth_death

Error 170 parsing the xml input file

Could not find object associated with idref RelaxedClock.c:anthus_aco_sub

Error detected about here:
  <beast>
      <run id='mcmc' spec='MCMC'>
          <logger id='tracelog'>
              <log id='rate.c:anthus_aco_sub' spec='beast.evolution.branchratemodel.RateStatistic'>
                  <input>

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richelbilderbeek commented Mar 8, 2018 •
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Create file anthus_aco_sub_calibrated_rln.xml to reproduce file with:

  • an MRCA prior with all taxa
  • a RLN clock

richelbilderbeek pushed a commit that referenced this issue Mar 8, 2018
Create test for #22
d42351b
@richelbilderbeek richelbilderbeek added this to the v1.13 milestone Mar 12, 2018
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