modify DESCRIPTION, write codemeta.json, manually edit codemeta.json

ropensci · Oct 12, 2017 · 0eae1fe · 0eae1fe
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diff --git a/.Rbuildignore b/.Rbuildignore
@@ -9,3 +9,4 @@ README.Rmd
 ^\.httr-oauth$
 ^CONDUCT\.md$
 ^FAQs\.md$
+^codemeta\.json$
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,10 @@
 Package: biomartr
 Title: Genomic Data Retrieval
 Version: 0.6.0.9000
-Author: Hajk-Georg Drost
-Maintainer: Hajk-Georg Drost <hgd23@cam.ac.uk>
+Authors@R: person("Hajk-Georg", "Drost",
+                role = c("aut", "cre"),
+                email = "hgd23@cam.ac.uk",
+                comment = c(ORCID = "http://orcid.org/0000-0002-1567-306X"))
 Description: Perform metagenomic data retrieval and functional annotation
     retrieval. In detail, this package aims to provide users with a standardized
     way to automate genome, proteome, coding sequence ('CDS'), 'GFF', and metagenome
@@ -42,3 +44,6 @@ URL: https://github.com/ropensci/biomartr
 BugReports: https://github.com/ropensci/biomartr/issues
 RoxygenNote: 6.0.1
 Encoding: UTF-8
+X-schema.org-keywords: BioMart, genomic-data-retrieval, annotation-retrieval, database-retrieval, NCBI, ENSEMBL, biological-data-retrieval 
+X-schema.org-applicationCategory: Data Access 
+X-schema.org-isPartof: "ropensci.org"
diff --git a/codemeta.json b/codemeta.json
@@ -0,0 +1,296 @@
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+  "identifier": "biomartr",
+  "description": "Perform metagenomic data retrieval and functional annotation\n    retrieval. In detail, this package aims to provide users with a standardized\n    way to automate genome, proteome, coding sequence ('CDS'), 'GFF', and metagenome\n    retrieval from 'NCBI' and 'ENSEMBL' databases. Furthermore, an interface to the 'BioMart' database\n    (Smedley et al. (2009) <doi:10.1186/1471-2164-10-22>) allows users to retrieve\n    functional annotation for genomic loci. Users can download entire databases such\n    as 'NCBI RefSeq' (Pruitt et al. (2007) <doi:10.1093/nar/gkl842>), 'NCBI nr',\n    'NCBI nt' and 'NCBI Genbank' (Benson et al. (2013) <doi:10.1093/nar/gks1195>) as\n    well as 'ENSEMBL' and 'ENSEMBLGENOMES' with only one command.",
+  "name": "biomartr: Genomic Data Retrieval",
+  "codeRepository": "https://github.com/ropensci/biomartr",
+  "issueTracker": "https://github.com/ropensci/biomartr/issues",
+  "license": "https://spdx.org/licenses/GPL-2.0",
+  "version": "0.6.0.9000",
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+}