update GitHub action workflow #63
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# 2023-06-18 | |
# https://github.com/r-lib/actions/tree/v2/examples | |
# https://github.com/r-lib/actions#where-to-find-help | |
on: [push, pull_request, workflow_dispatch] | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: macos-latest, r: 'release'} | |
- {os: windows-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
- {os: ubuntu-latest, r: 'release'} | |
- {os: ubuntu-latest, r: 'oldrel-1'} | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
R_KEEP_PKG_SOURCE: yes | |
R_COMPILE_AND_INSTALL_PACKAGES: never | |
COUCHDB_TEST_USER: ${{ secrets.COUCHDB_TEST_USER }} | |
COUCHDB_TEST_PWD: ${{ secrets.COUCHDB_TEST_PWD }} | |
steps: | |
- name: Install development libraries | |
if: runner.os == 'Linux' | |
run: sudo apt-get install -y libjq-dev | |
# generic workflow: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
http-user-agent: ${{ matrix.config.http-user-agent }} | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
cache-version: 1 | |
extra-packages: remotes, DBI, RSQLite, duckdb, rcmdcheck, covr | |
- uses: r-lib/actions/setup-pandoc@v2 | |
# databases: | |
# https://github.com/ankane/setup-postgres#setup-postgres | |
# Works on Linux, Mac, and Windows | |
- name: PostgreSQL | |
uses: ankane/setup-postgres@v1 | |
with: | |
database: test | |
# https://github.com/ankane/setup-mongodb#setup-mongodb | |
# Works on Linux, Mac, and Windows | |
- name: MongoDB | |
uses: ankane/setup-mongodb@v1 | |
# https://github.com/ankane/setup-elasticsearch#setup-elasticsearch | |
# Works on Linux, Mac, and Windows | |
- name: ElasticSearch | |
uses: ankane/setup-elasticsearch@v1 | |
# https://github.com/iamssen/couchdb-github-action | |
- name: CouchDB | |
if: runner.os == 'Linux' | |
uses: iamssen/couchdb-github-action@master | |
with: | |
couchdb-version: '3.1' | |
# nodbi: | |
- name: Install duckdb extension library | |
run: | | |
library(duckdb) | |
drv <- duckdb() | |
con <- dbConnect(drv) | |
dbExecute(con, 'INSTALL json;') | |
dbDisconnect(con) | |
duckdb_shutdown(drv) | |
shell: Rscript {0} | |
# generic workflow: | |
- uses: r-lib/actions/check-r-package@v2 | |
with: | |
upload-snapshots: true | |
# test coverage: | |
- name: Test coverage | |
if: matrix.config.os == 'ubuntu-latest' && matrix.config.r == 'release' | |
# covr::codecov() uploads using environment variable CODECOV_TOKEN | |
run: covr::codecov(quiet = FALSE) | |
shell: Rscript {0} | |
env: | |
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |