update pkgdown reference, #46

_pkgdown.yml

@@ -41,9 +41,16 @@ reference:
   - pitch_to_df
   - intensity_to_df
   - formant_to_df
+  - df_to_eaf
+  - df_to_exb
+  - remove_textgrid_tier
   - read_from_folder
 - title:  Create an interactive viewer
   desc: Extracct sound and spectrograms from your data and merge them into the interactive table
 - contents:
   - extract_intervals
   - create_glossed_document
+  - add_leading_symbols
+  - create_image_look_up
+  - create_sound_play
+  - create_viewer

codemeta.json

@@ -14,7 +14,7 @@
     "name": "R",
     "url": "https://r-project.org"
   },
-  "runtimePlatform": "R version 4.2.0 (2022-04-22)",
+  "runtimePlatform": "R version 4.2.1 (2022-06-23)",
   "provider": {
     "@id": "https://cran.r-project.org",
     "@type": "Organization",
@@ -233,9 +233,21 @@
       "identifier": "tools",
       "name": "tools"
     },
+    "11": {
+      "@type": "SoftwareApplication",
+      "identifier": "mime",
+      "name": "mime",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=mime"
+    },
     "SystemRequirements": "pandoc (>= 1.14) - http://pandoc.org"
   },
-  "fileSize": "4227.246KB",
+  "fileSize": "4224.739KB",
   "citation": [
     {
       "@type": "SoftwareSourceCode",

docs/additional/glossed_document.html

@@ -383,8 +383,8 @@ <h2>2017.04 Fairytale about the rooster</h2>
 <p>	Когда колючка воткнулась, [он] ушел к Бихтаю.</p>
 <p>5.	бихьтай=ло	ишуишу	й-ис-он-ч1игу	Гъули-ди	,	гьеге-й=ло	ссу	енш-ч1у-кку=ло	р-ухх-и	р-иъ-е-сса=ду	б-укъ-и-й	=гъоди	гьербади	.</p>
 <p>	Бихтай=add	дома-дома	f-находить-pst(aor)-neg.cvb	Гъули-erg		dem-f=add	neg.cop	rfl-ad-el=add	¬an2-вынимать-pst(aor)	¬an2-приходить-¬pst-neg.fut=quot	an-гнать-pst-pf	=rep	прочь	</p>
-<p>	Гъули не обнаружил дома Бихтай, дома ее нет, из себя не вынул и
-пошел дальше.</p>
+<p>	Гъули не обнаружил дома Бихтай, дома ее нет, из себя не вынул и пошел
+дальше.</p>
 <p>6.	б-uʔ-oн-ни=гъоди	гьербади	гьелъу-кку	Умалай-хо	,	Умалай-ди	букъийгъоди	гьел-ъо	ссу=гъо	ден	реъун-ни-й	хур-ди=гъо	й-иъ-ин-не=ду	.</p>
 <p>	an-идти-pst-pst(aor)=rep	прочь	там-el	Умалай-ad.lat		Умалай-erg		dem.obl-sup.lat	neg.cop=quot	я	быть_свободным-pst-cvb	поле-lat=quot	f-приходить-¬pst-hab=quot	</p>
 <p>	Оттуда пошел к Умалаю,</p>
@@ -411,8 +411,8 @@ <h2>2017.04 Fairytale about the rooster</h2>
 <p>	Три дня не ели, мы с ней не зная, сказал он.</p>
 <p>14.	гье-лъу-кку	б–и-йб–и-й	б-охъ-о-йб-охъ-о-й		-хо	гьеге-й=ло	й-ис-он-ч1игу	lа	Загьраъил-хо	.</p>
 <p>	dem-dat-el	an–pst(aor)-cvb(pf)-an–pst(aor)-cvb(pf)	an-дойти-pst-cvb(pf)-an-дойти-pst-cvb(pf)	-	-apud.lat	dem-f=add	f-находить–neg.cvb	-sup-	Захрай.obl-apud.lat	</p>
-<p>	Оттуда он ушёл и дошёл до Айшат Исмаиловой и её не обнаружив, он
-ушёл и дошёл до Захраил Шамиля.</p>
+<p>	Оттуда он ушёл и дошёл до Айшат Исмаиловой и её не обнаружив, он ушёл
+и дошёл до Захраил Шамиля.</p>
 <p>15.	й–и-й	Загьраъил-ди=ло	б-укъ-и-й	.</p>
 <p>	f–pst(aor)-cvb(pf)	Захрай.obl-erg=add	an-гнать-pst-pf	</p>
 <p>	Захраил …?</p>

docs/additional/stimuli_viewer.html

@@ -1306,6 +1306,13 @@
   type: "output",
   renderOnNullValue: true,
   initialize: function(el, width, height) {
+    // in order that the type=number inputs return a number
+    $.valHooks.number = {
+      get: function(el) {
+        var value = parseFloat(el.value);
+        return isNaN(value) ? "" : value;
+      }
+    };
     $(el).html(' ');
     return {
       data: null,
@@ -3424,8 +3431,8 @@ <h1 class="title toc-ignore">Sound Viewer</h1>
 <h1 class="tabset tabset-fade tabset-pills"></h1>
 <div id="data" class="section level2">
 <h2>data</h2>
-<div id="htmlwidget-27edccb2b4d844c11b99" style="width:100%;height:auto;" class="datatables html-widget"></div>
-<script type="application/json" data-for="htmlwidget-27edccb2b4d844c11b99">{"x":{"filter":"top","vertical":false,"filterHTML":"<tr>\n  <td data-type=\"character\" style=\"vertical-align: top;\">\n    <div class=\"form-group has-feedback\" style=\"margin-bottom: auto;\">\n      <input type=\"search\" placeholder=\"All\" class=\"form-control\" style=\"width: 100%;\"/>\n      <span class=\"glyphicon glyphicon-remove-circle form-control-feedback\"><\/span>\n    <\/div>\n  <\/td>\n  <td data-type=\"character\" style=\"vertical-align: top;\">\n    <div class=\"form-group has-feedback\" style=\"margin-bottom: auto;\">\n      <input type=\"search\" placeholder=\"All\" class=\"form-control\" style=\"width: 100%;\"/>\n      <span class=\"glyphicon glyphicon-remove-circle form-control-feedback\"><\/span>\n    <\/div>\n  <\/td>\n  <td data-type=\"character\" style=\"vertical-align: top;\">\n    <div class=\"form-group has-feedback\" style=\"margin-bottom: auto;\">\n      <input type=\"search\" placeholder=\"All\" class=\"form-control\" style=\"width: 100%;\"/>\n      <span class=\"glyphicon glyphicon-remove-circle form-control-feedback\"><\/span>\n    <\/div>\n  <\/td>\n<\/tr>","data":[["tip","tap","top"],["ı","æ","ɒ"],["<a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'pic_appear(\"s1_pics/1_s1_ı.png\", \"\")'> &#x1f441;<a> <a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'sound_play(\"s1_sounds/1_s1_ı.wav\")'> &#x1f442;<a>","<a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'pic_appear(\"s1_pics/2_s1_æ.png\", \"\")'> &#x1f441;<a> <a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'sound_play(\"s1_sounds/2_s1_æ.wav\")'> &#x1f442;<a>","<a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'pic_appear(\"s1_pics/3_s1_ɒ.png\", \"\")'> &#x1f441;<a> <a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'sound_play(\"s1_sounds/3_s1_ɒ.wav\")'> &#x1f442;<a>"]],"container":"<table class=\"display\">\n  <thead>\n    <tr>\n      <th>words<\/th>\n      <th>sounds<\/th>\n      <th>viewer<\/th>\n    <\/tr>\n  <\/thead>\n<\/table>","options":{"pageLength":50,"dom":"tip","columnDefs":[],"order":[],"autoWidth":false,"orderClasses":false,"orderCellsTop":true}},"evals":[],"jsHooks":[]}</script>
+<div id="htmlwidget-523ecb6617bbd72d00ec" style="width:100%;height:auto;" class="datatables html-widget"></div>
+<script type="application/json" data-for="htmlwidget-523ecb6617bbd72d00ec">{"x":{"filter":"top","vertical":false,"filterHTML":"<tr>\n  <td data-type=\"character\" style=\"vertical-align: top;\">\n    <div class=\"form-group has-feedback\" style=\"margin-bottom: auto;\">\n      <input type=\"search\" placeholder=\"All\" class=\"form-control\" style=\"width: 100%;\"/>\n      <span class=\"glyphicon glyphicon-remove-circle form-control-feedback\"><\/span>\n    <\/div>\n  <\/td>\n  <td data-type=\"character\" style=\"vertical-align: top;\">\n    <div class=\"form-group has-feedback\" style=\"margin-bottom: auto;\">\n      <input type=\"search\" placeholder=\"All\" class=\"form-control\" style=\"width: 100%;\"/>\n      <span class=\"glyphicon glyphicon-remove-circle form-control-feedback\"><\/span>\n    <\/div>\n  <\/td>\n  <td data-type=\"character\" style=\"vertical-align: top;\">\n    <div class=\"form-group has-feedback\" style=\"margin-bottom: auto;\">\n      <input type=\"search\" placeholder=\"All\" class=\"form-control\" style=\"width: 100%;\"/>\n      <span class=\"glyphicon glyphicon-remove-circle form-control-feedback\"><\/span>\n    <\/div>\n  <\/td>\n<\/tr>","data":[["tip","tap","top"],["ı","æ","ɒ"],["<a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'pic_appear(\"s1_pics/1_s1_ı.png\", \"\")'> &#x1f441;<a> <a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'sound_play(\"s1_sounds/1_s1_ı.wav\")'> &#x1f442;<a>","<a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'pic_appear(\"s1_pics/2_s1_æ.png\", \"\")'> &#x1f441;<a> <a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'sound_play(\"s1_sounds/2_s1_æ.wav\")'> &#x1f442;<a>","<a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'pic_appear(\"s1_pics/3_s1_ɒ.png\", \"\")'> &#x1f441;<a> <a onmouseover=\"resize(this, '200%')\" onmouseout=\"resize(this, '100%')\" onclick = 'sound_play(\"s1_sounds/3_s1_ɒ.wav\")'> &#x1f442;<a>"]],"container":"<table class=\"display\">\n  <thead>\n    <tr>\n      <th>words<\/th>\n      <th>sounds<\/th>\n      <th>viewer<\/th>\n    <\/tr>\n  <\/thead>\n<\/table>","options":{"pageLength":50,"dom":"tip","columnDefs":[],"order":[],"autoWidth":false,"orderClasses":false,"orderCellsTop":true}},"evals":[],"jsHooks":[]}</script>
 <div id="my_block" class="my_block" onclick="pic_disappear()">
 <span class="close">×</span> <img class="my_img" id="my_img">
 <div id="caption" class="caption">