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- The function
get_study_subtreegains the argument
tip_labelto control the formatting of the tip labels, #90, reported by @bomeara
- The new function
is_in_treetakes a list of OTT ids (i.e., the output of
ott_id()), and returns a vector of logical indiicating whether they are included in the synthetic tree (workaround #31).
citation("rotl")now includes the reference to the Open Tree of Life publication.
- The "How to use rotl?" vignette was updated to document the behavior of v3 of the OTL API which returns an HTTP error code 400 when the request for induced subtree includes taxa that are not in the synthetic tree (fix #84)