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added to man files about being albe to regex filter #385
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sckott committed Jun 11, 2015
1 parent a651015 commit 29dc6fa
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3 changes: 2 additions & 1 deletion R/get_boldid.R
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Expand Up @@ -37,7 +37,8 @@
#' @section Filtering:
#' The parameters \code{division}, \code{parent}, and \code{rank} are not
#' used in the search to the data provider, but are used in filtering the data down to a
#' subset that is closer to the target you want.
#' subset that is closer to the target you want. For all these parameters,
#' you can use regex strings since we use \code{\link{grep}} internally to match.
#'
#' @seealso \code{\link[taxize]{get_uid}}, \code{\link[taxize]{classification}}
#'
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3 changes: 2 additions & 1 deletion R/get_colid.R
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Expand Up @@ -32,7 +32,8 @@
#' @section Filtering:
#' The parameters \code{kingdom}, \code{phylum}, \code{class}, \code{order}, \code{family},
#' and \code{rank} are not used in the search to the data provider, but are used in filtering
#' the data down to a subset that is closer to the target you want.
#' the data down to a subset that is closer to the target you want. For all these parameters,
#' you can use regex strings since we use \code{\link{grep}} internally to match.
#'
#' @seealso \code{\link[taxize]{get_tsn}}, \code{\link[taxize]{get_colid}},
#' \code{\link[taxize]{get_tpsid}}, \code{\link[taxize]{get_eolid}}
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3 changes: 2 additions & 1 deletion R/get_gbifid.R
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Expand Up @@ -40,7 +40,8 @@
#' @section Filtering:
#' The parameters \code{phylum}, \code{class}, \code{order}, \code{family}, and \code{rank}
#' are not used in the search to the data provider, but are used in filtering the data down
#' to a subset that is closer to the target you want.
#' to a subset that is closer to the target you want. For all these parameters,
#' you can use regex strings since we use \code{\link{grep}} internally to match.
#'
#' @examples \dontrun{
#' get_gbifid(sciname='Poa annua')
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3 changes: 2 additions & 1 deletion R/get_tpsid.R
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Expand Up @@ -27,7 +27,8 @@
#' @section Filtering:
#' The parameters \code{family} and \code{rank} are not used in the search to the data
#' provider, but are used in filtering the data down to a subset that is closer to the
#' target you want.
#' target you want. For all these parameters,
#' you can use regex strings since we use \code{\link{grep}} internally to match.
#'
#' @seealso \code{\link[taxize]{get_tsn}}, \code{\link[taxize]{get_tpsid}}
#'
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3 changes: 2 additions & 1 deletion R/get_ubioid.R
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Expand Up @@ -32,7 +32,8 @@
#' @section Filtering:
#' The parameters \code{family} and \code{rank} are not used in the search to the data
#' provider, but are used in filtering the data down to a subset that is closer to the
#' target you want.
#' target you want. For all these parameters,
#' you can use regex strings since we use \code{\link{grep}} internally to match.
#'
#' @seealso \code{\link[taxize]{get_uid}}, \code{\link[taxize]{ubio_search}}
#'
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3 changes: 2 additions & 1 deletion R/get_uid.R
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Expand Up @@ -33,7 +33,8 @@
#' @section Filtering:
#' The parameters \code{division} and \code{rank} are not used in the search to the
#' data provider, but are used in filtering the data down to a subset that is closer
#' to the target you want.
#' to the target you want. For all these parameters, you can use regex strings since
#' we use \code{\link{grep}} internally to match.
#'
#' @seealso \code{\link[taxize]{get_tsn}}, \code{\link[taxize]{classification}}
#'
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3 changes: 2 additions & 1 deletion man/get_boldid.Rd
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Expand Up @@ -85,7 +85,8 @@ Get the BOLD (Barcode of Life) code for a search term.

The parameters \code{division}, \code{parent}, and \code{rank} are not
used in the search to the data provider, but are used in filtering the data down to a
subset that is closer to the target you want.
subset that is closer to the target you want. For all these parameters,
you can use regex strings since we use \code{\link{grep}} internally to match.
}
\examples{
\dontrun{
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3 changes: 2 additions & 1 deletion man/get_colid.Rd
Original file line number Diff line number Diff line change
Expand Up @@ -81,7 +81,8 @@ Get the Catalogue of Life ID from taxonomic names.

The parameters \code{kingdom}, \code{phylum}, \code{class}, \code{order}, \code{family},
and \code{rank} are not used in the search to the data provider, but are used in filtering
the data down to a subset that is closer to the target you want.
the data down to a subset that is closer to the target you want. For all these parameters,
you can use regex strings since we use \code{\link{grep}} internally to match.
}
\examples{
\dontrun{
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3 changes: 2 additions & 1 deletion man/get_gbifid.Rd
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Expand Up @@ -82,7 +82,8 @@ exact match we return the options to you to pick from.

The parameters \code{phylum}, \code{class}, \code{order}, \code{family}, and \code{rank}
are not used in the search to the data provider, but are used in filtering the data down
to a subset that is closer to the target you want.
to a subset that is closer to the target you want. For all these parameters,
you can use regex strings since we use \code{\link{grep}} internally to match.
}
\examples{
\dontrun{
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3 changes: 2 additions & 1 deletion man/get_tpsid.Rd
Original file line number Diff line number Diff line change
Expand Up @@ -71,7 +71,8 @@ Get the NameID codes from Tropicos for taxonomic names.
The parameters \code{family} and \code{rank} are not used in the search to the data
provider, but are used in filtering the data down to a subset that is closer to the
target you want.
target you want. For all these parameters,
you can use regex strings since we use \code{\link{grep}} internally to match.
}
\examples{
\dontrun{
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3 changes: 2 additions & 1 deletion man/get_ubioid.Rd
Original file line number Diff line number Diff line change
Expand Up @@ -75,7 +75,8 @@ to search for names.

The parameters \code{family} and \code{rank} are not used in the search to the data
provider, but are used in filtering the data down to a subset that is closer to the
target you want.
target you want. For all these parameters,
you can use regex strings since we use \code{\link{grep}} internally to match.
}
\examples{
\dontrun{
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3 changes: 2 additions & 1 deletion man/get_uid.Rd
Original file line number Diff line number Diff line change
Expand Up @@ -75,7 +75,8 @@ Retrieve the Unique Identifier (UID) of a taxon from NCBI taxonomy browser.
The parameters \code{division} and \code{rank} are not used in the search to the
data provider, but are used in filtering the data down to a subset that is closer
to the target you want.
to the target you want. For all these parameters, you can use regex strings since
we use \code{\link{grep}} internally to match.
}
\examples{
\dontrun{
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