-
-
Notifications
You must be signed in to change notification settings - Fork 3
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #89 from rseng/update/analysis-2023-09-20
Update from update/analysis-2023-09-20
- Loading branch information
Showing
71 changed files
with
35,500 additions
and
31,138 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,7 +1,7 @@ | ||
| { | ||
| "Python": 5482, | ||
| "R": 2189, | ||
| "Python": 5501, | ||
| "R": 2190, | ||
| "Cpp": 439, | ||
| "Js": 1633, | ||
| "Js": 1683, | ||
| "Go": 246 | ||
| } |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,9 +1,9 @@ | ||
| { | ||
| "python_deps": 4495, | ||
| "python_deps": 4506, | ||
| "cpp_deps": 439, | ||
| "r_deps": 2189, | ||
| "js_deps": 1633, | ||
| "r_deps": 2190, | ||
| "js_deps": 1683, | ||
| "go_deps": 246, | ||
| "total_repos": 5073, | ||
| "total_parsed": 2593 | ||
| "total_repos": 5092, | ||
| "total_parsed": 2605 | ||
| } |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,109 @@ | ||
| --- | ||
| title: github/BradhamLab/icat | ||
| layout: repo | ||
| tipue_search_active: true | ||
| exclude_from_search: true | ||
| --- | ||
| # Software Credit | ||
|
|
||
| |Manager|Name|Credit| | ||
| |-------|----|------| | ||
| |pypi|[numpy](https://www.numpy.org)|0.305| | ||
| |pypi|[python-igraph](https://pypi.org/project/python-igraph)|0.1| | ||
| |pypi|[igraph](https://igraph.org/python)|0.099| | ||
| |pypi|[numba](https://numba.pydata.org)|0.044| | ||
| |pypi|[pytest](https://docs.pytest.org/en/latest/)|0.034| | ||
| |pypi|[scipy](https://www.scipy.org)|0.03| | ||
| |pypi|[scikit-learn](http://scikit-learn.org)|0.025| | ||
| |pypi|[nose](http://readthedocs.org/docs/nose/)|0.02| | ||
| |pypi|[pytest-xdist](https://pypi.org/project/pytest-xdist)|0.018| | ||
| |pypi|[hypothesis](https://pypi.org/project/hypothesis)|0.018| | ||
| |pypi|[pytz](https://pypi.org/project/pytz)|0.018| | ||
| |pypi|[python-dateutil](https://pypi.org/project/python-dateutil)|0.018| | ||
| |pypi|[networkx](https://pypi.org/project/networkx)|0.011| | ||
| |pypi|[cairocffi](https://pypi.org/project/cairocffi)|0.011| | ||
| |pypi|[sphinxbootstrap4theme](https://pypi.org/project/sphinxbootstrap4theme)|0.011| | ||
| |pypi|[Sphinx](https://pypi.org/project/Sphinx)|0.011| | ||
| |pypi|[texttable](https://pypi.org/project/texttable)|0.011| | ||
| |setup.py|github/BradhamLab/icat|0.01| | ||
| |pypi|[joblib](https://pypi.org/project/joblib)|0.007| | ||
| |pypi|[seaborn](https://pypi.org/project/seaborn)|0.007| | ||
| |pypi|[pandas](https://pandas.pydata.org)|0.006| | ||
| |pypi|[pyamg](https://pypi.org/project/pyamg)|0.005| | ||
| |pypi|[mypy](https://pypi.org/project/mypy)|0.005| | ||
| |pypi|[black](https://pypi.org/project/black)|0.005| | ||
| |pypi|[flake8](https://pypi.org/project/flake8)|0.005| | ||
| |pypi|[pytest-cov](https://pypi.org/project/pytest-cov)|0.005| | ||
| |pypi|[sphinxext-opengraph](https://pypi.org/project/sphinxext-opengraph)|0.005| | ||
| |pypi|[sphinx-prompt](https://pypi.org/project/sphinx-prompt)|0.005| | ||
| |pypi|[Pillow](https://pypi.org/project/Pillow)|0.005| | ||
| |pypi|[numpydoc](https://pypi.org/project/numpydoc)|0.005| | ||
| |pypi|[sphinx-gallery](https://pypi.org/project/sphinx-gallery)|0.005| | ||
| |pypi|[sphinx](https://pypi.org/project/sphinx)|0.005| | ||
| |pypi|[scikit-image](https://pypi.org/project/scikit-image)|0.005| | ||
| |pypi|[memory-profiler](https://pypi.org/project/memory-profiler)|0.005| | ||
| |pypi|[matplotlib](https://pypi.org/project/matplotlib)|0.005| | ||
| |pypi|[threadpoolctl](https://pypi.org/project/threadpoolctl)|0.005| | ||
| |pypi|[requests](https://pypi.org/project/requests)|0.002| | ||
| |pypi|[slack-sdk](https://pypi.org/project/slack-sdk)|0.002| | ||
| |pypi|[ipywidgets](https://pypi.org/project/ipywidgets)|0.002| | ||
| |pypi|[wheel](https://pypi.org/project/wheel)|0.002| | ||
| |pypi|[twine](https://pypi.org/project/twine)|0.002| | ||
| |pypi|[py-make](https://pypi.org/project/py-make)|0.002| | ||
| |pypi|[importlib-resources](https://pypi.org/project/importlib-resources)|0.002| | ||
| |pypi|[colorama](https://pypi.org/project/colorama)|0.002| | ||
| |pypi|[tqdm](https://tqdm.github.io)|0.002| | ||
| |pypi|[profimp](https://pypi.org/project/profimp)|0.002| | ||
| |pypi|[zarr](https://pypi.org/project/zarr)|0.002| | ||
| |pypi|[zappy](https://pypi.org/project/zappy)|0.002| | ||
| |pypi|[fsspec](https://pypi.org/project/fsspec)|0.002| | ||
| |pypi|[dask](https://pypi.org/project/dask)|0.002| | ||
| |pypi|[pytest-nunit](https://pypi.org/project/pytest-nunit)|0.002| | ||
| |pypi|[pytest>=4.4](https://pypi.org/project/pytest>=4.4)|0.002| | ||
| |pypi|[scikit-misc>=0.1.3](https://pypi.org/project/scikit-misc>=0.1.3)|0.002| | ||
| |pypi|[scrublet](https://pypi.org/project/scrublet)|0.002| | ||
| |pypi|[scanorama](https://pypi.org/project/scanorama)|0.002| | ||
| |pypi|[cugraph>=0.9](https://pypi.org/project/cugraph>=0.9)|0.002| | ||
| |pypi|[cuml>=0.9](https://pypi.org/project/cuml>=0.9)|0.002| | ||
| |pypi|[cudf>=0.9](https://pypi.org/project/cudf>=0.9)|0.002| | ||
| |pypi|[magic-impute>=2.0](https://pypi.org/project/magic-impute>=2.0)|0.002| | ||
| |pypi|[louvain>=0.6,!=0.6.2](https://pypi.org/project/louvain>=0.6,!=0.6.2)|0.002| | ||
| |pypi|[leidenalg](https://pypi.org/project/leidenalg)|0.002| | ||
| |pypi|[harmonypy](https://pypi.org/project/harmonypy)|0.002| | ||
| |pypi|[myst-parser](https://pypi.org/project/myst-parser)|0.002| | ||
| |pypi|[typing_extensions](https://pypi.org/project/typing_extensions)|0.002| | ||
| |pypi|[scanpydoc](https://pypi.org/project/scanpydoc)|0.002| | ||
| |pypi|[sphinx-rtd-theme>=1.0](https://pypi.org/project/sphinx-rtd-theme>=1.0)|0.002| | ||
| |pypi|[sphinx>=4.4](https://pypi.org/project/sphinx>=4.4)|0.002| | ||
| |pypi|[docutils](https://pypi.org/project/docutils)|0.002| | ||
| |pypi|[black>=20.8b1](https://pypi.org/project/black>=20.8b1)|0.002| | ||
| |pypi|[setuptools_scm](https://pypi.org/project/setuptools_scm)|0.002| | ||
| |pypi|[bbknn](https://pypi.org/project/bbknn)|0.002| | ||
| |pypi|[importlib_metadata>=0.7](https://pypi.org/project/importlib_metadata>=0.7)|0.002| | ||
| |pypi|[session-info](https://pypi.org/project/session-info)|0.002| | ||
| |pypi|[packaging](https://pypi.org/project/packaging)|0.002| | ||
| |pypi|[umap-learn>=0.3.10](https://pypi.org/project/umap-learn>=0.3.10)|0.002| | ||
| |pypi|[numba>=0.41.0](https://pypi.org/project/numba>=0.41.0)|0.002| | ||
| |pypi|[natsort](https://pypi.org/project/natsort)|0.002| | ||
| |pypi|[networkx>=2.3](https://pypi.org/project/networkx>=2.3)|0.002| | ||
| |pypi|[patsy](https://pypi.org/project/patsy)|0.002| | ||
| |pypi|[statsmodels>=0.10.0rc2](https://pypi.org/project/statsmodels>=0.10.0rc2)|0.002| | ||
| |pypi|[scikit-learn>=0.22](https://pypi.org/project/scikit-learn>=0.22)|0.002| | ||
| |pypi|[flit_core](https://pypi.org/project/flit_core)|0.002| | ||
| |pypi|[h5py>=3](https://pypi.org/project/h5py>=3)|0.002| | ||
| |pypi|[scipy>=1.4](https://pypi.org/project/scipy>=1.4)|0.002| | ||
| |pypi|[pandas>=1.0](https://pypi.org/project/pandas>=1.0)|0.002| | ||
| |pypi|[matplotlib>=3.4](https://pypi.org/project/matplotlib>=3.4)|0.002| | ||
| |pypi|[numpy>=1.17.0](https://pypi.org/project/numpy>=1.17.0)|0.002| | ||
| |pypi|[anndata>=0.7.4](https://pypi.org/project/anndata>=0.7.4)|0.002| | ||
| |pypi|[ncfs](https://github.com/BradhamLab/ncfs)|0.001| | ||
| |pypi|[scanpy](https://scanpy.readthedocs.io)|0.001| | ||
| |pypi|[louvain](https://github.com/vtraag/louvain-igraph)|0.001| | ||
| |pypi|[sslouvain](https://github.com/dakota-hawkins/sslouvain)|0.001| | ||
| |pypi|[apricot-select](http://pypi.python.org/pypi/apricot-select/)|0.001| | ||
|
|
||
|
|
||
| > Note that credit values are rounded and expanded (so shared dependencies are represented as one record) and may not add to 1.0. Rounded values that hit zero are removed. | ||
|
|
||
| - Generated by [CiteLang](https://github.com/vsoch/citelang) |
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Oops, something went wrong.