Skip to content

Commit

Permalink
Automated deployment to update software database 2021-01-17 (#175)
Browse files Browse the repository at this point in the history
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
  • Loading branch information
github-actions[bot] and github-actions committed Jan 17, 2021
1 parent 953bdc2 commit 3c4c9d2
Show file tree
Hide file tree
Showing 46 changed files with 13,012 additions and 8,169 deletions.
39 changes: 39 additions & 0 deletions database/github/ShubhadeepSadhukhan1993/fastSF/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
{
"parser": "github",
"uid": "github/ShubhadeepSadhukhan1993/fastSF",
"url": "https://github.com/ShubhadeepSadhukhan1993/fastSF",
"data": {
"timestamp": "2021-01-17 00:54:41.447514",
"name": "fastSF",
"url": "https://api.github.com/repos/ShubhadeepSadhukhan1993/fastSF",
"full_name": "ShubhadeepSadhukhan1993/fastSF",
"html_url": "https://github.com/ShubhadeepSadhukhan1993/fastSF",
"private": false,
"description": "A hybrid parallel C++ code to compute structure function of different order",
"created_at": "2020-01-26T05:54:14Z",
"updated_at": "2021-01-04T13:56:58Z",
"clone_url": "https://github.com/ShubhadeepSadhukhan1993/fastSF.git",
"homepage": null,
"size": 4435,
"stargazers_count": 1,
"watchers_count": 1,
"language": "C++",
"open_issues_count": 0,
"license": {
"key": "bsd-3-clause",
"name": "BSD 3-Clause \"New\" or \"Revised\" License",
"spdx_id": "BSD-3-Clause",
"url": "https://api.github.com/licenses/bsd-3-clause",
"node_id": "MDc6TGljZW5zZTU="
},
"subscribers_count": 1,
"owner": {
"html_url": "https://github.com/ShubhadeepSadhukhan1993",
"avatar_url": "https://avatars0.githubusercontent.com/u/60309103?v=4",
"login": "ShubhadeepSadhukhan1993",
"type": "User"
},
"topics": []
},
"doi": "https://doi.org/10.5281/zenodo.4420031"
}
39 changes: 39 additions & 0 deletions database/github/SuLab/Wikidata-phenomizer/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
{
"parser": "github",
"uid": "github/SuLab/Wikidata-phenomizer",
"url": "https://github.com/SuLab/Wikidata-phenomizer",
"data": {
"timestamp": "2021-01-17 00:54:49.505679",
"name": "Wikidata-phenomizer",
"url": "https://api.github.com/repos/SuLab/Wikidata-phenomizer",
"full_name": "SuLab/Wikidata-phenomizer",
"html_url": "https://github.com/SuLab/Wikidata-phenomizer",
"private": false,
"description": "Incorporate wikidata statements into phenomizer",
"created_at": "2018-10-04T22:40:41Z",
"updated_at": "2020-01-21T17:53:02Z",
"clone_url": "https://github.com/SuLab/Wikidata-phenomizer.git",
"homepage": null,
"size": 134,
"stargazers_count": 2,
"watchers_count": 2,
"language": "Jupyter Notebook",
"open_issues_count": 6,
"license": {
"key": "mit",
"name": "MIT License",
"spdx_id": "MIT",
"url": "https://api.github.com/licenses/mit",
"node_id": "MDc6TGljZW5zZTEz"
},
"subscribers_count": 1,
"owner": {
"html_url": "https://github.com/SuLab",
"avatar_url": "https://avatars3.githubusercontent.com/u/1891115?v=4",
"login": "SuLab",
"type": "Organization"
},
"topics": []
},
"doi": "10.1101/799684"
}
45 changes: 45 additions & 0 deletions database/github/adigenova/wengan/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,45 @@
{
"parser": "github",
"uid": "github/adigenova/wengan",
"url": "https://github.com/adigenova/wengan",
"data": {
"timestamp": "2021-01-17 00:54:50.629273",
"name": "wengan",
"url": "https://api.github.com/repos/adigenova/wengan",
"full_name": "adigenova/wengan",
"html_url": "https://github.com/adigenova/wengan",
"private": false,
"description": "An accurate and ultra-fast hybrid genome assembler",
"created_at": "2019-03-04T10:09:30Z",
"updated_at": "2021-01-13T07:25:13Z",
"clone_url": "https://github.com/adigenova/wengan.git",
"homepage": "",
"size": 144,
"stargazers_count": 65,
"watchers_count": 65,
"language": "Perl",
"open_issues_count": 1,
"license": {
"key": "agpl-3.0",
"name": "GNU Affero General Public License v3.0",
"spdx_id": "AGPL-3.0",
"url": "https://api.github.com/licenses/agpl-3.0",
"node_id": "MDc6TGljZW5zZTE="
},
"subscribers_count": 5,
"owner": {
"html_url": "https://github.com/adigenova",
"avatar_url": "https://avatars3.githubusercontent.com/u/7844296?v=4",
"login": "adigenova",
"type": "User"
},
"topics": [
"illumina",
"nanopore",
"pacbio",
"hybrid",
"genome-assembler"
]
},
"doi": "10.1101/840447"
}
33 changes: 33 additions & 0 deletions database/github/gerthmicha/wolbachia-mlst/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,33 @@
{
"parser": "github",
"uid": "github/gerthmicha/wolbachia-mlst",
"url": "https://github.com/gerthmicha/wolbachia-mlst",
"data": {
"timestamp": "2021-01-17 00:54:49.179557",
"name": "wolbachia-mlst",
"url": "https://api.github.com/repos/gerthmicha/wolbachia-mlst",
"full_name": "gerthmicha/wolbachia-mlst",
"html_url": "https://github.com/gerthmicha/wolbachia-mlst",
"private": false,
"description": "Data from Bleidorn & Gerth (2017) A critical re-evaluation of multilocus sequence typing (MLST) efforts in Wolbachia. https://doi.org/10.1093/femsec/fix163",
"created_at": "2017-09-21T10:30:26Z",
"updated_at": "2017-11-29T09:16:54Z",
"clone_url": "https://github.com/gerthmicha/wolbachia-mlst.git",
"homepage": "",
"size": 2061,
"stargazers_count": 0,
"watchers_count": 0,
"language": null,
"open_issues_count": 0,
"license": null,
"subscribers_count": 1,
"owner": {
"html_url": "https://github.com/gerthmicha",
"avatar_url": "https://avatars2.githubusercontent.com/u/17022831?v=4",
"login": "gerthmicha",
"type": "User"
},
"topics": []
},
"doi": "10.1101/836908"
}
33 changes: 33 additions & 0 deletions database/github/optimusmoose/jsms/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,33 @@
{
"parser": "github",
"uid": "github/optimusmoose/jsms",
"url": "https://github.com/optimusmoose/jsms",
"data": {
"timestamp": "2021-01-17 00:54:48.565077",
"name": "jsms",
"url": "https://api.github.com/repos/optimusmoose/jsms",
"full_name": "optimusmoose/jsms",
"html_url": "https://github.com/optimusmoose/jsms",
"private": false,
"description": "A modular JavaScript viewer for mass spectrometry data",
"created_at": "2017-01-17T22:54:08Z",
"updated_at": "2020-10-01T15:26:00Z",
"clone_url": "https://github.com/optimusmoose/jsms.git",
"homepage": null,
"size": 99650,
"stargazers_count": 9,
"watchers_count": 9,
"language": "Java",
"open_issues_count": 2,
"license": null,
"subscribers_count": 4,
"owner": {
"html_url": "https://github.com/optimusmoose",
"avatar_url": "https://avatars2.githubusercontent.com/u/1541778?v=4",
"login": "optimusmoose",
"type": "User"
},
"topics": []
},
"doi": "10.1101/2019.12.27.889253"
}
39 changes: 39 additions & 0 deletions database/github/oruhnau/when2heat/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
{
"parser": "github",
"uid": "github/oruhnau/when2heat",
"url": "https://github.com/oruhnau/when2heat",
"data": {
"timestamp": "2021-01-17 00:54:50.074036",
"name": "when2heat",
"url": "https://api.github.com/repos/oruhnau/when2heat",
"full_name": "oruhnau/when2heat",
"html_url": "https://github.com/oruhnau/when2heat",
"private": false,
"description": "Heating Profiles",
"created_at": "2019-02-12T06:12:13Z",
"updated_at": "2020-11-29T07:06:44Z",
"clone_url": "https://github.com/oruhnau/when2heat.git",
"homepage": "",
"size": 49,
"stargazers_count": 11,
"watchers_count": 11,
"language": "Python",
"open_issues_count": 0,
"license": {
"key": "mit",
"name": "MIT License",
"spdx_id": "MIT",
"url": "https://api.github.com/licenses/mit",
"node_id": "MDc6TGljZW5zZTEz"
},
"subscribers_count": 0,
"owner": {
"html_url": "https://github.com/oruhnau",
"avatar_url": "https://avatars2.githubusercontent.com/u/40352101?v=4",
"login": "oruhnau",
"type": "User"
},
"topics": []
},
"doi": "10.1038/S41597-019-0199-Y"
}
39 changes: 39 additions & 0 deletions database/github/refresh-bio/whisper/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,39 @@
{
"parser": "github",
"uid": "github/refresh-bio/whisper",
"url": "https://github.com/refresh-bio/Whisper",
"data": {
"timestamp": "2021-01-17 00:54:49.796657",
"name": "Whisper",
"url": "https://api.github.com/repos/refresh-bio/Whisper",
"full_name": "refresh-bio/Whisper",
"html_url": "https://github.com/refresh-bio/Whisper",
"private": false,
"description": null,
"created_at": "2017-05-18T08:02:20Z",
"updated_at": "2020-07-17T05:07:58Z",
"clone_url": "https://github.com/refresh-bio/Whisper.git",
"homepage": null,
"size": 2180,
"stargazers_count": 20,
"watchers_count": 20,
"language": "C++",
"open_issues_count": 12,
"license": {
"key": "gpl-3.0",
"name": "GNU General Public License v3.0",
"spdx_id": "GPL-3.0",
"url": "https://api.github.com/licenses/gpl-3.0",
"node_id": "MDc6TGljZW5zZTk="
},
"subscribers_count": 2,
"owner": {
"html_url": "https://github.com/refresh-bio",
"avatar_url": "https://avatars3.githubusercontent.com/u/16046310?v=4",
"login": "refresh-bio",
"type": "Organization"
},
"topics": []
},
"doi": "10.1101/2019.12.18.881292"
}
53 changes: 53 additions & 0 deletions database/github/ropensci/targets/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
{
"parser": "github",
"uid": "github/ropensci/targets",
"url": "https://github.com/ropensci/targets",
"data": {
"timestamp": "2021-01-17 00:54:41.737138",
"name": "targets",
"url": "https://api.github.com/repos/ropensci/targets",
"full_name": "ropensci/targets",
"html_url": "https://github.com/ropensci/targets",
"private": false,
"description": "Function-oriented Make-like declarative workflows for R",
"created_at": "2019-08-01T17:33:25Z",
"updated_at": "2021-01-16T22:45:21Z",
"clone_url": "https://github.com/ropensci/targets.git",
"homepage": "https://docs.ropensci.org/targets/",
"size": 2003,
"stargazers_count": 201,
"watchers_count": 201,
"language": "R",
"open_issues_count": 0,
"license": {
"key": "other",
"name": "Other",
"spdx_id": "NOASSERTION",
"url": null,
"node_id": "MDc6TGljZW5zZTA="
},
"subscribers_count": 11,
"owner": {
"html_url": "https://github.com/ropensci",
"avatar_url": "https://avatars3.githubusercontent.com/u/1200269?v=4",
"login": "ropensci",
"type": "Organization"
},
"topics": [
"reproducibility",
"high-performance-computing",
"r",
"data-science",
"pipeline",
"rstats",
"r-package",
"workflow",
"targets",
"reproducible-research",
"make",
"r-targetopia",
"peer-reviewed"
]
},
"doi": "https://doi.org/10.5281/zenodo.4438841"
}
44 changes: 44 additions & 0 deletions database/github/ruanjue/wtdbg2/metadata.json
Original file line number Diff line number Diff line change
@@ -0,0 +1,44 @@
{
"parser": "github",
"uid": "github/ruanjue/wtdbg2",
"url": "https://github.com/ruanjue/wtdbg2",
"data": {
"timestamp": "2021-01-17 00:54:48.874421",
"name": "wtdbg2",
"url": "https://api.github.com/repos/ruanjue/wtdbg2",
"full_name": "ruanjue/wtdbg2",
"html_url": "https://github.com/ruanjue/wtdbg2",
"private": false,
"description": "Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly",
"created_at": "2017-09-29T10:24:08Z",
"updated_at": "2021-01-08T02:19:30Z",
"clone_url": "https://github.com/ruanjue/wtdbg2.git",
"homepage": "",
"size": 832,
"stargazers_count": 397,
"watchers_count": 397,
"language": "C",
"open_issues_count": 12,
"license": {
"key": "gpl-3.0",
"name": "GNU General Public License v3.0",
"spdx_id": "GPL-3.0",
"url": "https://api.github.com/licenses/gpl-3.0",
"node_id": "MDc6TGljZW5zZTk="
},
"subscribers_count": 34,
"owner": {
"html_url": "https://github.com/ruanjue",
"avatar_url": "https://avatars1.githubusercontent.com/u/16264260?v=4",
"login": "ruanjue",
"type": "User"
},
"topics": [
"pacbio",
"nanopore",
"assembly",
"alignment"
]
},
"doi": "10.1038/S41592-019-0669-3"
}

0 comments on commit 3c4c9d2

Please sign in to comment.