post workshop refresh

config/_default/menus.toml

@@ -48,9 +48,14 @@
   url = "people"
   weight = 50
 
-# uncomment when ready to share source code and add repo link to upper navbar
 [[main]]
   pre = "<i class=\"fab fa-github fa-lg\"></i>"
   name = ""
   url = "https://github.com/rstudio-education/rmd4medicine"
   weight = 60
+
+[[main]]
+  pre = "<i class=\"fas fa-cloud fa-lg\"></i>"
+  name = ""
+  url = "https://rstd.io/rmd4medicine-cloud"
+  weight = 70

content/home/hero.md

@@ -38,10 +38,10 @@ hero_media = "rmd4med-sq.jpg"
 #   Display link(s) by specifying a URL and label below. Icon is optional for `[cta]`.
 #   Remove a link/note by deleting a cta/note block.
 [cta]
-  url = "https://github.com/rstudio-education/rmd4medicine"
-  label = "GitHub"
-  icon_pack = ""
-  icon = ""
+  url = "/materials/"
+  label = "Start Here"
+  icon_pack = "fas"
+  icon = "door-open"
 
 [cta_alt]
   url = "about"
@@ -58,3 +58,5 @@ A four-hour workshop that will take you on a tour of how to get from data to man
 + How to add tables for different outputs
 + Workflows for working with data
 + How to include and style graphics
+
+This is the website for a workshop by [Dr. Alison Hill](https://alison.rbind.io/) from [RStudio](https://www.rstudio.com/). It was last updated for the [R / Medicine conference](https://r-medicine.com/) on 2019-09-12.

static/book/preface.html

@@ -25,7 +25,7 @@
 <meta name="author" content="Peter Higgins" />
 
 
-<meta name="date" content="2019-09-12" />
+<meta name="date" content="2019-09-14" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />
@@ -94,7 +94,7 @@ <h1>
 <h1 class="title">R Markdown for Medicine</h1>
 <p class="author"><em>Alison Hill<a href="#fn1" class="footnote-ref" id="fnref1"><sup>1</sup></a></em></p>
 <p class="author"><em>Peter Higgins<a href="#fn2" class="footnote-ref" id="fnref2"><sup>2</sup></a></em></p>
-<p class="date"><em>2019-09-12</em></p>
+<p class="date"><em>2019-09-14</em></p>
 </div>
 <div id="preface" class="section level1 unnumbered">
 <h1>Preface</h1>

static/book/prework.html

@@ -25,7 +25,7 @@
 <meta name="author" content="Peter Higgins" />
 
 
-<meta name="date" content="2019-09-12" />
+<meta name="date" content="2019-09-14" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />

static/book/uplevels.html

@@ -25,7 +25,7 @@
 <meta name="author" content="Peter Higgins" />
 
 
-<meta name="date" content="2019-09-12" />
+<meta name="date" content="2019-09-14" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />

static/book/workshop-outline.html

@@ -25,7 +25,7 @@
 <meta name="author" content="Peter Higgins" />
 
 
-<meta name="date" content="2019-09-12" />
+<meta name="date" content="2019-09-14" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1" />
   <meta name="apple-mobile-web-app-capable" content="yes" />

static/slides/00-loop.Rmd

@@ -44,9 +44,6 @@ class: title-slide, center, middle
 
 #### [rmd4medicine.netlify.com/](https://rmd4medicine.netlify.com/)
 
-<!-- this ends up being the title slide since seal = FALSE-->
-
-???
 
 ---
 class: middle, center
@@ -55,7 +52,7 @@ class: middle, center
 
 # Go here and log in (free):
 
-cloud link
+https://rstd.io/rmd4medicine-cloud
 
 ---
 class: middle, center

static/slides/00-loop.html

@@ -4,7 +4,7 @@
     <title>Welcome</title>
     <meta charset="utf-8" />
     <meta name="author" content="Alison Hill" />
-    <meta name="date" content="2019-09-12" />
+    <meta name="date" content="2019-09-14" />
     <link href="libs/remark-css/default.css" rel="stylesheet" />
     <script>
     // Adapted from https://github.com/gnab/remark/wiki/Configuration#using-javascript-to-create-a-continuously-looping-slideshow
@@ -51,9 +51,6 @@
 
 #### [rmd4medicine.netlify.com/](https://rmd4medicine.netlify.com/)
 
-&lt;!-- this ends up being the title slide since seal = FALSE--&gt;
-
-???
 
 ---
 class: middle, center
@@ -62,7 +59,7 @@
 
 # Go here and log in (free):
 
-cloud link
+https://rstd.io/rmd4medicine-cloud
 
 ---
 class: middle, center

static/slides/01-rmd-anatomy.Rmd

@@ -84,7 +84,7 @@ class: middle, center
 
 # Go here and log in (free):
 
-cloud link
+https://rstd.io/rmd4medicine-cloud
 
 ---
 class: middle, center
@@ -103,7 +103,7 @@ class: middle, center
 ---
 layout: true
 
-<div class="my-footer"><span>https://rmd4medicine.netlify.com</span></div>
+<div class="my-footer"><span>https://rstd.io/rmd4medicine-cloud</span></div>
 
 ---
 background-image: url(images/hello.jpg)
@@ -1024,16 +1024,9 @@ how can we make it easier on ourselves to explore the code in here?
 show how to add chunk labels and view in IDE interactively
 
 ---
+class: middle, center
 
-Add slide here on pet versus livestock
-
-.pull-left[
-
-]
-
-.pull-right[
-
-]
+# Pet or livestock?
 
 .footnote[https://masalmon.eu/2017/08/08/chunkpets/]
 
@@ -1046,25 +1039,23 @@ class: middle, center
 
 ### Good
 
-`a-z`
-
-`A-Z`
+`myplot`
 
-`0-9`
+`my-plot`
 
-`/`
+`myPlot`
 
-`-`
+`myplot1`
 
 ]
 
 .pull-right[
 
 ### Bad
 
-`_`
+`my_plot`
 
-spaces
+`my plot`
 
 everything else!
 

static/slides/01-rmd-anatomy.html

@@ -4,7 +4,7 @@
     <title>R Markdown Anatomy</title>
     <meta charset="utf-8" />
     <meta name="author" content="Alison Hill" />
-    <meta name="date" content="2019-09-12" />
+    <meta name="date" content="2019-09-14" />
     <link href="libs/remark-css/default.css" rel="stylesheet" />
     <link href="libs/countdown/countdown.css" rel="stylesheet" />
     <script src="libs/countdown/countdown.js"></script>
@@ -65,7 +65,7 @@
 
 # Go here and log in (free):
 
-cloud link
+https://rstd.io/rmd4medicine-cloud
 
 ---
 class: middle, center
@@ -84,7 +84,7 @@
 ---
 layout: true
 
-&lt;div class="my-footer"&gt;&lt;span&gt;https://rmd4medicine.netlify.com&lt;/span&gt;&lt;/div&gt;
+&lt;div class="my-footer"&gt;&lt;span&gt;https://rstd.io/rmd4medicine-cloud&lt;/span&gt;&lt;/div&gt;
 
 ---
 background-image: url(images/hello.jpg)
@@ -298,7 +298,7 @@
 
 _psst...`01-explore-alison-params.Rmd` is also there..._
 
-<div class="countdown" id="timer_5d7ac306" style="right:0;bottom:0;" data-warnwhen="0">
+<div class="countdown" id="timer_5d7d4a9b" style="right:0;bottom:0;" data-warnwhen="0">
 <code class="countdown-time"><span class="countdown-digits minutes">05</span><span class="countdown-digits colon">:</span><span class="countdown-digits seconds">00</span></code>
 </div>
 
@@ -444,7 +444,7 @@
 
 _psst...answers on the next slide..._
 
-<div class="countdown" id="timer_5d7ac3f5" style="right:0;bottom:0;" data-warnwhen="0">
+<div class="countdown" id="timer_5d7d4aa8" style="right:0;bottom:0;" data-warnwhen="0">
 <code class="countdown-time"><span class="countdown-digits minutes">03</span><span class="countdown-digits colon">:</span><span class="countdown-digits seconds">00</span></code>
 </div>
 
@@ -1100,16 +1100,9 @@
 show how to add chunk labels and view in IDE interactively
 
 ---
+class: middle, center
 
-Add slide here on pet versus livestock
-
-.pull-left[
-
-]
-
-.pull-right[
-
-]
+# Pet or livestock?
 
 .footnote[https://masalmon.eu/2017/08/08/chunkpets/]
 
@@ -1122,25 +1115,23 @@
 
 ### Good
 
-`a-z`
-
-`A-Z`
+`myplot`
 
-`0-9`
+`my-plot`
 
-`/`
+`myPlot`
 
-`-`
+`myplot1`
 
 ]
 
 .pull-right[
 
 ### Bad
 
-`_`
+`my_plot`
 
-spaces
+`my plot`
 
 everything else!
 
@@ -1202,7 +1193,7 @@
 _psst...`01-explore-alison-params.Rmd` is still there..._
 
 
-<div class="countdown" id="timer_5d7ac0ea" style="right:0;bottom:0;" data-warnwhen="0">
+<div class="countdown" id="timer_5d7d4cba" style="right:0;bottom:0;" data-warnwhen="0">
 <code class="countdown-time"><span class="countdown-digits minutes">05</span><span class="countdown-digits colon">:</span><span class="countdown-digits seconds">00</span></code>
 </div>
 
@@ -1247,7 +1238,7 @@
 
 # Time for a break!
 
-<div class="countdown blink-colon noupdate-15" id="timer_5d7ac3c3" style="right:0;bottom:0;" data-warnwhen="0">
+<div class="countdown blink-colon noupdate-15" id="timer_5d7d4bea" style="right:0;bottom:0;" data-warnwhen="0">
 <code class="countdown-time"><span class="countdown-digits minutes">10</span><span class="countdown-digits colon">:</span><span class="countdown-digits seconds">00</span></code>
 </div>
     </textarea>

static/slides/02-output-tables.Rmd

@@ -63,10 +63,20 @@ class: title-slide, center, middle
 
 #### [rmd4medicine.netlify.com/](https://rmd4medicine.netlify.com/)
 
+
+---
+class: middle, center
+
+# <i class="fas fa-cloud"></i>
+
+# Go here and log in (free):
+
+https://rstd.io/rmd4medicine-cloud
+
 ---
 layout: true
 
-<div class="my-footer"><span>https://rmd4medicine.netlify.com</span></div>
+<div class="my-footer"><span>https://rstd.io/rmd4medicine-cloud</span></div>
 
 
 ---